RNA–Protein interactions for RNA: ENST00000588909.1

TPGS2-208, Transcript of tubulin polyglutamylase complex subunit 2, human

TSL 5

Gene TPGS2, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPGS2-208	ENST00000588909	MTMR9	Q96QG7	549 aa		28.82	■■■□□ 2.2
TPGS2-208	ENST00000588909	JPH2	Q9BR39	696 aa	Predicted RBP	28.82	■■■□□ 2.2
TPGS2-208	ENST00000588909	DHX33	Q9H6R0	707 aa	Known RBP	28.82	■■■□□ 2.2
TPGS2-208	ENST00000588909	RNF216	Q9NWF9	866 aa	Predicted RBP	28.82	■■■□□ 2.2
TPGS2-208	ENST00000588909	CLDND1	Q9NY35	253 aa		28.82	■■■□□ 2.2
TPGS2-208	ENST00000588909	COL4A3BP	Q9Y5P4	624 aa		28.82	■■■□□ 2.2
TPGS2-208	ENST00000588909	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	28.82	■■■□□ 2.2
TPGS2-208	ENST00000588909	POTEM	A6NI47	508 aa		28.81	■■■□□ 2.2
TPGS2-208	ENST00000588909	SRGAP2C	P0DJJ0	459 aa		28.81	■■■□□ 2.2
TPGS2-208	ENST00000588909	RBM25	P49756	843 aa	Known RBP	28.81	■■■□□ 2.2
TPGS2-208	ENST00000588909	LRRC55	Q6ZSA7	311 aa		28.81	■■■□□ 2.2
TPGS2-208	ENST00000588909	FAM43B	Q6ZT52	329 aa	Predicted RBP	28.81	■■■□□ 2.2
TPGS2-208	ENST00000588909	OTUD6A	Q7L8S5	288 aa		28.81	■■■□□ 2.2
TPGS2-208	ENST00000588909	ZNF410	Q86VK4	478 aa		28.81	■■■□□ 2.2
TPGS2-208	ENST00000588909	CWH43	Q9H720	699 aa		28.81	■■■□□ 2.2
TPGS2-208	ENST00000588909	SH2B1	Q9NRF2	756 aa	Predicted RBP	28.81	■■■□□ 2.2
TPGS2-208	ENST00000588909	SFPQ	P23246	707 aa	Known RBP eCLIP	28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	PBX3	P40426	434 aa		28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	CDC42EP1	Q00587	391 aa		28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	EMC2	Q15006	297 aa		28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	ZNF174	Q15697	407 aa		28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	LEXM	Q3ZCV2	418 aa		28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	CLLU1OS	Q5K130	101 aa		28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	CATSPER4	Q7RTX7	472 aa		28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	COLGALT1	Q8NBJ5	622 aa		28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	PABPC5	Q96DU9	382 aa	Known RBP	28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	TMEM117	Q9H0C3	514 aa		28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	PIN4	Q9Y237	131 aa	Known RBP	28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	PCDHB12	Q9Y5F1	795 aa		28.8	■■■□□ 2.2
TPGS2-208	ENST00000588909	ATF7	P17544	494 aa	Predicted RBP	28.79	■■■□□ 2.2
TPGS2-208	ENST00000588909	RFC5	P40937	340 aa		28.79	■■■□□ 2.2
TPGS2-208	ENST00000588909	NAALADL2	Q58DX5	795 aa		28.79	■■■□□ 2.2
TPGS2-208	ENST00000588909	ADGRD2	Q7Z7M1	963 aa		28.79	■■■□□ 2.2
TPGS2-208	ENST00000588909	ABI1	Q8IZP0	508 aa		28.79	■■■□□ 2.2
TPGS2-208	ENST00000588909	FBXO18	Q8NFZ0	1043 aa		28.79	■■■□□ 2.2
TPGS2-208	ENST00000588909	HELQ	Q8TDG4	1101 aa		28.79	■■■□□ 2.2
TPGS2-208	ENST00000588909	HSD17B14	Q9BPX1	270 aa		28.79	■■■□□ 2.2
TPGS2-208	ENST00000588909	IFT122	Q9HBG6	1241 aa		28.79	■■■□□ 2.2
TPGS2-208	ENST00000588909	BDP1	A6H8Y1	2624 aa		28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909		A0A0U1RQF3	1178 aa		28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	LINC01565	O15544	149 aa		28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	IL9	P15248	144 aa		28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	HMGN5	P82970	282 aa	Known RBP	28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	LAMTOR4	Q0VGL1	99 aa		28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	GNL2	Q13823	731 aa	Known RBP	28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	CLUL1	Q15846	466 aa		28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	TWF2	Q6IBS0	349 aa	Known RBP	28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	THNSL1	Q8IYQ7	743 aa		28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	NEK9	Q8TD19	979 aa		28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	PIGO	Q8TEQ8	1089 aa		28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	PSPC1	Q8WXF1	523 aa	Known RBP	28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	LPP	Q93052	612 aa		28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	MINDY3	Q9H8M7	445 aa		28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	AAAS	Q9NRG9	546 aa		28.78	■■■□□ 2.2
TPGS2-208	ENST00000588909	FGF18	O76093	207 aa		28.77	■■■□□ 2.2
TPGS2-208	ENST00000588909	DLX2	Q07687	328 aa	Predicted RBP	28.77	■■■□□ 2.2
TPGS2-208	ENST00000588909	NBR1	Q14596	966 aa		28.77	■■■□□ 2.2
TPGS2-208	ENST00000588909	PTCRA	Q6ISU1	281 aa	Predicted RBP	28.77	■■■□□ 2.2
TPGS2-208	ENST00000588909	RBM23	Q86U06	439 aa	Known RBP	28.77	■■■□□ 2.2
TPGS2-208	ENST00000588909	ZNF598	Q86UK7	904 aa	Known RBP	28.77	■■■□□ 2.2
TPGS2-208	ENST00000588909	MTR	Q99707	1265 aa		28.77	■■■□□ 2.2
TPGS2-208	ENST00000588909	INO80B	Q9C086	356 aa	Predicted RBP	28.77	■■■□□ 2.2
TPGS2-208	ENST00000588909	FOXP1	Q9H334	677 aa	Predicted RBP	28.77	■■■□□ 2.2
TPGS2-208	ENST00000588909	XPNPEP1	Q9NQW7	623 aa		28.77	■■■□□ 2.2
TPGS2-208	ENST00000588909	DACT1	Q9NYF0	836 aa		28.77	■■■□□ 2.2
TPGS2-208	ENST00000588909	HOXA2	O43364	376 aa		28.76	■■■□□ 2.19
TPGS2-208	ENST00000588909	LTBR	P36941	435 aa		28.76	■■■□□ 2.19
TPGS2-208	ENST00000588909	PHKA2	P46019	1235 aa		28.76	■■■□□ 2.19
TPGS2-208	ENST00000588909	RABEP1	Q15276	862 aa		28.76	■■■□□ 2.19
TPGS2-208	ENST00000588909	CHST12	Q9NRB3	414 aa		28.76	■■■□□ 2.19
TPGS2-208	ENST00000588909	PPME1	Q9Y570	386 aa		28.76	■■■□□ 2.19
TPGS2-208	ENST00000588909	PLXNA4	Q9HCM2	1894 aa		28.76	■■■□□ 2.19
TPGS2-208	ENST00000588909	MEIS3P2	A8K0S8	358 aa		28.75	■■■□□ 2.19
TPGS2-208	ENST00000588909	TEC	P42680	631 aa		28.75	■■■□□ 2.19
TPGS2-208	ENST00000588909	COL19A1	Q14993	1142 aa		28.75	■■■□□ 2.19
TPGS2-208	ENST00000588909	EXOC8	Q8IYI6	725 aa		28.75	■■■□□ 2.19
TPGS2-208	ENST00000588909	RNF149	Q8NC42	400 aa		28.75	■■■□□ 2.19
TPGS2-208	ENST00000588909	MICAL1	Q8TDZ2	1067 aa		28.75	■■■□□ 2.19
TPGS2-208	ENST00000588909	CD2BP2	O95400	341 aa	Known RBP	28.74	■■■□□ 2.19
TPGS2-208	ENST00000588909	LAG3	P18627	525 aa		28.74	■■■□□ 2.19
TPGS2-208	ENST00000588909	TTC38	Q5R3I4	469 aa		28.74	■■■□□ 2.19
TPGS2-208	ENST00000588909	FERMT3	Q86UX7	667 aa		28.74	■■■□□ 2.19
TPGS2-208	ENST00000588909	NOSTRIN	Q8IVI9	506 aa		28.74	■■■□□ 2.19
TPGS2-208	ENST00000588909	LRRC43	Q8N309	656 aa		28.74	■■■□□ 2.19
TPGS2-208	ENST00000588909	CCDC43	Q96MW1	224 aa	Known RBP	28.74	■■■□□ 2.19
TPGS2-208	ENST00000588909	MED24	O75448	989 aa		28.73	■■■□□ 2.19
TPGS2-208	ENST00000588909	LYPLA2	O95372	231 aa		28.73	■■■□□ 2.19
TPGS2-208	ENST00000588909	EOMES	O95936	686 aa		28.73	■■■□□ 2.19
TPGS2-208	ENST00000588909	NRIP1	P48552	1158 aa		28.73	■■■□□ 2.19
TPGS2-208	ENST00000588909	ERVFC1	P60507	584 aa		28.73	■■■□□ 2.19
TPGS2-208	ENST00000588909	CTC1	Q2NKJ3	1217 aa		28.73	■■■□□ 2.19
TPGS2-208	ENST00000588909	KCNT2	Q6UVM3	1135 aa		28.73	■■■□□ 2.19
TPGS2-208	ENST00000588909	ASAP3	Q8TDY4	903 aa		28.73	■■■□□ 2.19
TPGS2-208	ENST00000588909	TCP11	Q8WWU5	503 aa		28.73	■■■□□ 2.19
TPGS2-208	ENST00000588909	CD320	Q9NPF0	282 aa		28.73	■■■□□ 2.19
TPGS2-208	ENST00000588909	FAM105A	Q9NUU6	356 aa		28.73	■■■□□ 2.19
TPGS2-208	ENST00000588909	ARID2	Q68CP9	1835 aa		28.73	■■■□□ 2.19
TPGS2-208	ENST00000588909	GRXCR2	A6NFK2	248 aa		28.72	■■■□□ 2.19
TPGS2-208	ENST00000588909	TBX10	O75333	385 aa		28.72	■■■□□ 2.19
TPGS2-208	ENST00000588909	OR52Z1	P0C646	297 aa		28.72	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms