RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 GCNT4Q9P109 453 aa15.27■□□□□ 0.04
NEDD4L-223ENST00000588516 SALL4Q9UJQ4 1053 aa15.27■□□□□ 0.04
NEDD4L-223ENST00000588516 TMEM59LQ9UK28 342 aa15.27■□□□□ 0.04
NEDD4L-223ENST00000588516 AMFRQ9UKV5 643 aa15.27■□□□□ 0.04
NEDD4L-223ENST00000588516 TTC7AQ9ULT0 858 aaPredicted RBP15.27■□□□□ 0.04
NEDD4L-223ENST00000588516 TMX2Q9Y320 296 aa15.27■□□□□ 0.04
NEDD4L-223ENST00000588516 FRMPD4Q14CM0 1322 aa15.27■□□□□ 0.03
NEDD4L-223ENST00000588516 HMGB1P1B2RPK0 211 aaPredicted RBP15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 AGPSO00116 658 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 KCNK3O14649 394 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 NKRFO15226 690 aaKnown RBP eCLIP15.26■□□□□ 0.036e-8■□□□□ 10.9
NEDD4L-223ENST00000588516 PSMD10O75832 226 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 AKAP3O75969 853 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 GH2P01242 217 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 TMEM253P0C7T8 217 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 MYBP10242 640 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 BCRP11274 1271 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 SLC9A1P19634 815 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 GBP1P32455 592 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 SOX5P35711 763 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 ZNF131P52739 623 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 GUCY2DQ02846 1103 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 SPDYCQ5MJ68 293 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 ANGEL2Q5VTE6 544 aaKnown RBP15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 FKBP1CQ5VVH2 108 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 LRRC31Q6UY01 552 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 RUFY4Q6ZNE9 571 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 C1orf186Q6ZWK4 172 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 B4GALNT4Q76KP1 1039 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 ZNF571Q7Z3V5 609 aaPredicted RBP15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 FAM178BQ8IXR5 827 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 MORC4Q8TE76 937 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 KRT12Q99456 494 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 FGFBP2Q9BYJ0 223 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 DEFB129Q9H1M3 183 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 FAM114A2Q9NRY5 505 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 MAP3K20Q9NYL2 800 aaKnown RBP15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 FEM1BQ9UK73 627 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 RRP15Q9Y3B9 282 aaKnown RBP15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 ASTN1O14525 1302 aa15.26■□□□□ 0.03
NEDD4L-223ENST00000588516 KIAA0100Q14667 2235 aaKnown RBP15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 IGLV3-22A0A075B6J6 115 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 GOLGA6L10A0A0M3HER8 536 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 ARHGEF35A5YM69 484 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 MEIS1O00470 390 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 EBAG9O00559 213 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 MAPK13O15264 365 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 TBC1D12O60347 775 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 FTCDO95954 541 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 VIL1P09327 827 aaKnown RBP15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 MYBL2P10244 700 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 EN2P19622 333 aaPredicted RBP15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 HSPA9P38646 679 aaKnown RBP15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 PSMC6P62333 389 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 SREBF2Q12772 1141 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 CEP55Q53EZ4 464 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 DPY19L2P1Q6NXN4 242 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 MICALCLQ6ZW33 695 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 SH3BP5LQ7L8J4 393 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 CROCCP2Q86T23 111 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 MCF2L2Q86YR7 1114 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 TPH2Q8IWU9 490 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 RASGEF1CQ8N431 466 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 TPCN2Q8NHX9 752 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 SCFD2Q8WU76 684 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 FAM151AQ8WW52 585 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 CTNNBL1Q8WYA6 563 aaPredicted RBP15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 GJA10Q969M2 543 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 RANBP17Q9H2T7 1088 aaKnown RBP15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 R3HDMLQ9H3Y0 253 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 NENFQ9UMX5 172 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 NCANO14594 1321 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 PFASO15067 1338 aa15.25■□□□□ 0.03
NEDD4L-223ENST00000588516 CEP104O60308 925 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 SLITRK3O94933 977 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 GDF11O95390 407 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 TNFAIP3P21580 790 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 HOXD13P35453 343 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 FMO5P49326 533 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 CASP5P51878 434 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 SLC7A5Q01650 507 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 INTS8Q75QN2 995 aaKnown RBP15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 ZNF720Q7Z2F6 126 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 RHOT2Q8IXI1 618 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 SYCP3Q8IZU3 236 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 IQCKQ8N0W5 287 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 LRRC57Q8N9N7 239 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 HDAC7Q8WUI4 952 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 IFT81Q8WYA0 676 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 BORCS6Q96GS4 357 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 RUNDC3BQ96NL0 473 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 PSMB7Q99436 277 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 ZNF577Q9BSK1 485 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 RUSC1Q9BVN2 902 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 RAB17Q9H0T7 212 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 GINM1Q9NU53 330 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 DMAC2Q9NW81 257 aa15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 LARSQ9P2J5 1176 aaKnown RBP15.24■□□□□ 0.03
NEDD4L-223ENST00000588516 TMCO5BA8MYB1 307 aa15.23■□□□□ 0.03
NEDD4L-223ENST00000588516 MYO1CO00159 1063 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms