RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 Q4G0T1 1027 aa18.9■□□□□ 0.62
LINC01842-201ENST00000588275 XKR3Q5GH77 459 aa18.9■□□□□ 0.62
LINC01842-201ENST00000588275 TWF2Q6IBS0 349 aaKnown RBP18.9■□□□□ 0.62
LINC01842-201ENST00000588275 SYCE2Q6PIF2 218 aa18.9■□□□□ 0.62
LINC01842-201ENST00000588275 RUFY3Q7L099 469 aa18.9■□□□□ 0.62
LINC01842-201ENST00000588275 BLIDQ8IZY5 108 aa18.9■□□□□ 0.62
LINC01842-201ENST00000588275 SLC39A11Q8N1S5 342 aa18.9■□□□□ 0.62
LINC01842-201ENST00000588275 RDM1Q8NG50 284 aa18.9■□□□□ 0.62
LINC01842-201ENST00000588275 FDXACB1Q9BRP7 624 aaPredicted RBP18.9■□□□□ 0.62
LINC01842-201ENST00000588275 TSHZ2Q9NRE2 1034 aa18.9■□□□□ 0.62
LINC01842-201ENST00000588275 CDH22Q9UJ99 828 aa18.9■□□□□ 0.62
LINC01842-201ENST00000588275 DDX11L8A8MPP1 907 aa18.89■□□□□ 0.61
LINC01842-201ENST00000588275 ZC3H11AO75152 810 aaKnown RBP eCLIP18.89■□□□□ 0.61
LINC01842-201ENST00000588275 DEXIO95424 95 aa18.89■□□□□ 0.61
LINC01842-201ENST00000588275 EOMESO95936 686 aa18.89■□□□□ 0.61
LINC01842-201ENST00000588275 SFPQP23246 707 aaKnown RBP eCLIP18.89■□□□□ 0.61
LINC01842-201ENST00000588275 ALDH7A1P49419 539 aaKnown RBP18.89■□□□□ 0.61
LINC01842-201ENST00000588275 DNM2P50570 870 aa18.89■□□□□ 0.61
LINC01842-201ENST00000588275 KCNC3Q14003 757 aa18.89■□□□□ 0.61
LINC01842-201ENST00000588275 TARBP2Q15633 366 aaKnown RBP18.89■□□□□ 0.61
LINC01842-201ENST00000588275 TMEM184AQ6ZMB5 413 aa18.89■□□□□ 0.61
LINC01842-201ENST00000588275 ZNF598Q86UK7 904 aaKnown RBP18.89■□□□□ 0.61
LINC01842-201ENST00000588275 RHPN2Q8IUC4 686 aa18.89■□□□□ 0.61
LINC01842-201ENST00000588275 CASP10Q92851 521 aa18.89■□□□□ 0.61
LINC01842-201ENST00000588275 LPPQ93052 612 aa18.89■□□□□ 0.61
LINC01842-201ENST00000588275 TMEM169Q96HH4 297 aa18.89■□□□□ 0.61
LINC01842-201ENST00000588275 S1PR5Q9H228 398 aa18.89■□□□□ 0.61
LINC01842-201ENST00000588275 PIN4Q9Y237 131 aaKnown RBP18.89■□□□□ 0.61
LINC01842-201ENST00000588275 BCAR1P56945 870 aa18.88■□□□□ 0.61
LINC01842-201ENST00000588275 EVCP57679 992 aa18.88■□□□□ 0.61
LINC01842-201ENST00000588275 SIGLEC14Q08ET2 396 aa18.88■□□□□ 0.61
LINC01842-201ENST00000588275 BMP8AQ7Z5Y6 402 aa18.88■□□□□ 0.61
LINC01842-201ENST00000588275 TMEM87AQ8NBN3 555 aa18.88■□□□□ 0.61
LINC01842-201ENST00000588275 NLRP4Q96MN2 994 aa18.88■□□□□ 0.61
LINC01842-201ENST00000588275 AIFM3Q96NN9 605 aa18.88■□□□□ 0.61
LINC01842-201ENST00000588275 NIFKQ9BYG3 293 aaKnown RBP18.88■□□□□ 0.61
LINC01842-201ENST00000588275 SUCLA2Q9P2R7 463 aaPredicted RBP18.88■□□□□ 0.61
LINC01842-201ENST00000588275 DDX25Q9UHL0 483 aaKnown RBP18.88■□□□□ 0.61
LINC01842-201ENST00000588275 INPP5FQ9Y2H2 1132 aa18.88■□□□□ 0.61
LINC01842-201ENST00000588275 HCFC2Q9Y5Z7 792 aa18.88■□□□□ 0.61
LINC01842-201ENST00000588275 CYP46A1Q9Y6A2 500 aa18.88■□□□□ 0.61
LINC01842-201ENST00000588275 C2orf71A6NGG8 1288 aa18.87■□□□□ 0.61
LINC01842-201ENST00000588275 HOXB8P17481 243 aaPredicted RBP18.87■□□□□ 0.61
LINC01842-201ENST00000588275 PHKA2P46019 1235 aa18.87■□□□□ 0.61
LINC01842-201ENST00000588275 CDC42EP1Q00587 391 aa18.87■□□□□ 0.61
LINC01842-201ENST00000588275 BMS1Q14692 1282 aaKnown RBP18.87■□□□□ 0.61
LINC01842-201ENST00000588275 NONOQ15233 471 aaKnown RBP eCLIP18.87■□□□□ 0.61
LINC01842-201ENST00000588275 INF2Q27J81 1249 aa18.87■□□□□ 0.61
LINC01842-201ENST00000588275 TPRNQ4KMQ1 711 aa18.87■□□□□ 0.61
LINC01842-201ENST00000588275 IER5LQ5T953 404 aa18.87■□□□□ 0.61
LINC01842-201ENST00000588275 PLA2G4FQ68DD2 849 aa18.87■□□□□ 0.61
LINC01842-201ENST00000588275 CPLX2Q6PUV4 134 aaKnown RBP18.87■□□□□ 0.61
LINC01842-201ENST00000588275 CATSPER4Q7RTX7 472 aa18.87■□□□□ 0.61
LINC01842-201ENST00000588275 KSR1Q8IVT5 923 aa18.87■□□□□ 0.61
LINC01842-201ENST00000588275 PRSS33Q8NF86 280 aa18.87■□□□□ 0.61
LINC01842-201ENST00000588275 SLKQ9H2G2 1235 aaPredicted RBP18.87■□□□□ 0.61
LINC01842-201ENST00000588275 ZSWIM6Q9HCJ5 1215 aa18.87■□□□□ 0.61
LINC01842-201ENST00000588275 CHST12Q9NRB3 414 aa18.87■□□□□ 0.61
LINC01842-201ENST00000588275 CYP3A7-CYP3A51PA0A087WV96 503 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.86■□□□□ 0.61
LINC01842-201ENST00000588275 CLASP2O75122 1294 aaKnown RBP18.86■□□□□ 0.61
LINC01842-201ENST00000588275 CYP3A7P24462 503 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 PTPN21Q16825 1174 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 LETM2Q2VYF4 491 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 CES5AQ6NT32 575 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 ZNF410Q86VK4 478 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 VPS52Q8N1B4 723 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 FBXL6Q8N531 539 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 MRPL43Q8N983 215 aaKnown RBP18.86■□□□□ 0.61
LINC01842-201ENST00000588275 ETNPPLQ8TBG4 499 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 AUTS2Q8WXX7 1259 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 INO80BQ9C086 356 aaPredicted RBP18.86■□□□□ 0.61
LINC01842-201ENST00000588275 GBP3Q9H0R5 595 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 KCNJ14Q9UNX9 436 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 NR2E1Q9Y466 385 aa18.86■□□□□ 0.61
LINC01842-201ENST00000588275 IGKV6-21A0A0C4DH24 114 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 SLC37A4O43826 429 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 MAFO75444 373 aaPredicted RBP18.85■□□□□ 0.61
LINC01842-201ENST00000588275 STBD1O95210 358 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 CXCL14O95715 111 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 WEE2P0C1S8 567 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 PSMC5P62195 406 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 RNASELQ05823 741 aaKnown RBP18.85■□□□□ 0.61
LINC01842-201ENST00000588275 GLB1LQ6UWU2 654 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 B3GNT9Q6UX72 402 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 KRT25Q7Z3Z0 450 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 TMEM173Q86WV6 379 aaPredicted RBP18.85■□□□□ 0.61
LINC01842-201ENST00000588275 DAGLBQ8NCG7 672 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 CEP89Q96ST8 783 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 BMP2KQ9NSY1 1161 aaPredicted RBP18.85■□□□□ 0.61
LINC01842-201ENST00000588275 FAM105AQ9NUU6 356 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 KMT2EQ8IZD2 1858 aa18.85■□□□□ 0.61
LINC01842-201ENST00000588275 ZDBF2Q9HCK1 2354 aa18.84■□□□□ 0.61
LINC01842-201ENST00000588275 CCDC194A0A1B0GVG4 234 aa18.84■□□□□ 0.61
LINC01842-201ENST00000588275 MEIS3P2A8K0S8 358 aa18.84■□□□□ 0.61
LINC01842-201ENST00000588275 M0R2N6 131 aa18.84■□□□□ 0.61
LINC01842-201ENST00000588275 SKIP12755 728 aa18.84■□□□□ 0.61
LINC01842-201ENST00000588275 PTPN5P54829 565 aa18.84■□□□□ 0.61
LINC01842-201ENST00000588275 NPY5RQ15761 445 aa18.84■□□□□ 0.61
LINC01842-201ENST00000588275 RARS2Q5T160 578 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms