RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 NAMPTP43490 491 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 WDR5P61964 334 aaKnown RBP13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 CAPSQ13938 189 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 DHX8Q14562 1220 aaKnown RBP13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 GPNMBQ14956 572 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 PCBP1Q15365 356 aaKnown RBP eCLIP13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 CATSPER4Q7RTX7 472 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 KCNK18Q7Z418 384 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 SRGAP1Q7Z6B7 1085 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 FAM228AQ86W67 206 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 KSR1Q8IVT5 923 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 MYOCDQ8IZQ8 938 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 PDILTQ8N807 584 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 DEPTORQ8TB45 409 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 ASAP3Q8TDY4 903 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 TMEM40Q8WWA1 233 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 RUSC1Q9BVN2 902 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 LRRC27Q9C0I9 530 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 CUEDC2Q9H467 287 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 GPRC5CQ9NQ84 441 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 KCNG1Q9UIX4 513 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 PCDHA7Q9UN72 937 aa13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 NOC2LQ9Y3T9 749 aaKnown RBP13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 PHLPP2Q6ZVD8 1323 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 INO80B-WBP1J3KQ70 363 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 HIP1RO75146 1068 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 ARL2P36404 184 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 SLC12A3P55017 1021 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 RAB30Q15771 203 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 TMEM132AQ24JP5 1023 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 LRIT3Q3SXY7 679 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 RINT1Q6NUQ1 792 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 USP49Q70CQ1 688 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 SV2BQ7L1I2 683 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 IQUBQ8NA54 791 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 TET1Q8NFU7 2136 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 PHOSPHO2Q8TCD6 241 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 IPO9Q96P70 1041 aaKnown RBP13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 ZBED2Q9BTP6 218 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 NFKBIZQ9BYH8 718 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 AGO3Q9H9G7 860 aaKnown RBP13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 C17orf75Q9HAS0 396 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 MAGEF1Q9HAY2 307 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 CDHR5Q9HBB8 845 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 ERVK-5Q9HDB9 667 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 C1orf112Q9NSG2 853 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 DACT1Q9NYF0 836 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 CXXC1Q9P0U4 656 aaPredicted RBP13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 ODF2LQ9ULJ1 636 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 ST3GAL5Q9UNP4 418 aa13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 PIN4Q9Y237 131 aaKnown RBP13.14□□□□□ -0.31
SDHDP1-201ENST00000588055 CCDC169A6NNP5 214 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 FAM13AO94988 1023 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 GLRA2P23416 452 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 EFNA5P52803 228 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 SMTNP53814 917 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 AMPD3Q01432 767 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 POU5F1BQ06416 359 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 RAD51AP2Q09MP3 1159 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 MCM6Q14566 821 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 HABP4Q5JVS0 413 aaKnown RBP13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 RASIP1Q5U651 963 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 RESP18Q5W5W9 173 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 ADALQ6DHV7 355 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 C1orf186Q6ZWK4 172 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 CEP57L1Q8IYX8 460 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 DHX58Q96C10 678 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 CCDC34Q96HJ3 373 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 IFT122Q9HBG6 1241 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 BLOC1S4Q9NUP1 217 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 LARSQ9P2J5 1176 aaKnown RBP13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 MSRAQ9UJ68 235 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 LRFN2Q9ULH4 789 aa13.13□□□□□ -0.31
SDHDP1-201ENST00000588055 MYH11P35749 1972 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 TCHHQ07283 1943 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 H0YCG3 227 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 STAG3L1P0CL83 205 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 IBSPP21815 317 aaPredicted RBP13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 PTENP60484 403 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 SMAD3P84022 425 aaKnown RBP13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 MAPK6Q16659 721 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 CDCA2Q69YH5 1023 aaPredicted RBP13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 TWF2Q6IBS0 349 aaKnown RBP13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 VWCEQ96DN2 955 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 PRIMPOLQ96LW4 560 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 ADAM2Q99965 735 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 REEP2Q9BRK0 252 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 PANK2Q9BZ23 570 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 TNMDQ9H2S6 317 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 ZHX3Q9H4I2 956 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 KMT5AQ9NQR1 393 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 CHST12Q9NRB3 414 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms