RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 SIP14410 1827 aa16.48■□□□□ 0.23
NFIX-208ENST00000587260 IKBKBO14920 756 aa16.47■□□□□ 0.23
NFIX-208ENST00000587260 GAS2O43903 313 aaKnown RBP16.47■□□□□ 0.23
NFIX-208ENST00000587260 PTPN11Q06124 597 aaPredicted RBP16.47■□□□□ 0.23
NFIX-208ENST00000587260 TMEM62Q0P6H9 643 aa16.47■□□□□ 0.23
NFIX-208ENST00000587260 SMYD4Q8IYR2 804 aaPredicted RBP16.47■□□□□ 0.23
NFIX-208ENST00000587260 GUF1Q8N442 669 aaKnown RBP16.47■□□□□ 0.23
NFIX-208ENST00000587260 MYCT1Q8N699 235 aa16.47■□□□□ 0.23
NFIX-208ENST00000587260 LINC01465Q8N7H1 131 aa16.47■□□□□ 0.23
NFIX-208ENST00000587260 SLC43A3Q8NBI5 491 aa16.47■□□□□ 0.23
NFIX-208ENST00000587260 TCP11Q8WWU5 503 aa16.47■□□□□ 0.23
NFIX-208ENST00000587260 PSPC1Q8WXF1 523 aaKnown RBP16.47■□□□□ 0.23
NFIX-208ENST00000587260 KIFAP3Q92845 792 aa16.47■□□□□ 0.23
NFIX-208ENST00000587260 DHTKD1Q96HY7 919 aaPredicted RBP16.47■□□□□ 0.23
NFIX-208ENST00000587260 ZNF668Q96K58 619 aaPredicted RBP16.47■□□□□ 0.23
NFIX-208ENST00000587260 TRPV6Q9H1D0 765 aa16.47■□□□□ 0.23
NFIX-208ENST00000587260 SLC39A2Q9NP94 309 aa16.47■□□□□ 0.23
NFIX-208ENST00000587260 LARSQ9P2J5 1176 aaKnown RBP16.47■□□□□ 0.23
NFIX-208ENST00000587260 SUCLA2Q9P2R7 463 aaPredicted RBP16.47■□□□□ 0.23
NFIX-208ENST00000587260 B4GALT4O60513 344 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 PQBP1O60828 265 aaKnown RBP16.46■□□□□ 0.23
NFIX-208ENST00000587260 VTNP04004 478 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 PLS3P13797 630 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 GLRA2P23416 452 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 TMOD1P28289 359 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 DNM2P50570 870 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 PEX3P56589 373 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 STIM1Q13586 685 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 UVSSAQ2YD98 709 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 ODR4Q5SWX8 454 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 FOXR2Q6PJQ5 311 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 EPM2AIP1Q7L775 607 aaPredicted RBP16.46■□□□□ 0.23
NFIX-208ENST00000587260 RHPN2Q8IUC4 686 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 KSR1Q8IVT5 923 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 DHX40Q8IX18 779 aaKnown RBP16.46■□□□□ 0.23
NFIX-208ENST00000587260 ENOX1Q8TC92 643 aaKnown RBP16.46■□□□□ 0.23
NFIX-208ENST00000587260 DNAJB3Q8WWF6 145 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 WNT8BQ93098 351 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 NLRP4Q96MN2 994 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 CTAGE1Q96RT6 745 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 FIZ1Q96SL8 496 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 MAP7D2Q96T17 732 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 NTPCRQ9BSD7 190 aaKnown RBP16.46■□□□□ 0.23
NFIX-208ENST00000587260 KIFC3Q9BVG8 833 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 KCNG1Q9UIX4 513 aa16.46■□□□□ 0.23
NFIX-208ENST00000587260 SMIM35A0A1B0GVV1 85 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 SMTNL1A8MU46 457 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 KIF20AO95235 890 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 ARL2P36404 184 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 MRE11P49959 708 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 DMP1Q13316 513 aaPredicted RBP16.45■□□□□ 0.22
NFIX-208ENST00000587260 NCAPHQ15003 741 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 TRIM60Q495X7 471 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 IER5Q5VY09 327 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 SLC39A5Q6ZMH5 540 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 NECAB2Q7Z6G3 386 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 SERINC5Q86VE9 423 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 RNF214Q8ND24 703 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 SLC17A8Q8NDX2 589 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 SPIRE2Q8WWL2 714 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 PRPF31Q8WWY3 499 aaKnown RBP16.45■□□□□ 0.22
NFIX-208ENST00000587260 KCNN1Q92952 543 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 MED15Q96RN5 788 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 STRA6Q9BX79 667 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 FGFBP2Q9BYJ0 223 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 ST6GALNAC4Q9H4F1 302 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 GRPEL1Q9HAV7 217 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 RWDD2AQ9UIY3 292 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 ALPK3Q96L96 1907 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 LRRIQ4A6NIV6 560 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 CCDC169A6NNP5 214 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 K7ENM7 598 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 PSMA7O14818 248 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 LAMTOR4Q0VGL1 99 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 CAPSQ13938 189 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 BMT2Q1RMZ1 405 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 TAF2Q6P1X5 1199 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 ZNF720Q7Z2F6 126 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 LUZP1Q86V48 1076 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 FAM126BQ8IXS8 530 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 KIAA0319LQ8IZA0 1049 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 MYOCDQ8IZQ8 938 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 IFT74Q96LB3 600 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 SCLT1Q96NL6 688 aa16.45■□□□□ 0.22
NFIX-208ENST00000587260 RBAK-RBAKDNI3L0D1 243 aa16.44■□□□□ 0.22
NFIX-208ENST00000587260 EIF3DO15371 548 aaKnown RBP eCLIP16.44■□□□□ 0.22
NFIX-208ENST00000587260 SRGAP2CP0DJJ0 459 aa16.44■□□□□ 0.22
NFIX-208ENST00000587260 NMT1P30419 496 aaKnown RBP16.44■□□□□ 0.22
NFIX-208ENST00000587260 NPTX2P47972 431 aa16.44■□□□□ 0.22
NFIX-208ENST00000587260 CDK7P50613 346 aa16.44■□□□□ 0.22
NFIX-208ENST00000587260 MYL5Q02045 173 aa16.44■□□□□ 0.22
NFIX-208ENST00000587260 PAK1Q13153 545 aa16.44■□□□□ 0.22
NFIX-208ENST00000587260 CENPPQ6IPU0 288 aa16.44■□□□□ 0.22
NFIX-208ENST00000587260 FAM178BQ8IXR5 827 aa16.44■□□□□ 0.22
NFIX-208ENST00000587260 GLIS3Q8NEA6 775 aa16.44■□□□□ 0.22
NFIX-208ENST00000587260 ZNF507Q8TCN5 953 aa16.44■□□□□ 0.22
NFIX-208ENST00000587260 SCFD1Q8WVM8 642 aa16.44■□□□□ 0.22
NFIX-208ENST00000587260 DHX38Q92620 1227 aaKnown RBP16.44■□□□□ 0.22
NFIX-208ENST00000587260 MRPL44Q9H9J2 332 aaKnown RBP16.44■□□□□ 0.22
NFIX-208ENST00000587260 MAPK8IP1Q9UQF2 711 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms