RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 HIP1RO75146 1068 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 PLS3P13797 630 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 SMTNP53814 917 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 RTP1P59025 263 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 CACNB1Q02641 598 aaPredicted RBP11.42□□□□□ -0.58
LIG3-203ENST00000585370 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 CCDC40Q4G0X9 1142 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 FAM160B1Q5W0V3 765 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 SWSAP1Q6NVH7 229 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 SEPT14Q6ZU15 432 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 HS2ST1Q7LGA3 356 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 ZNF467Q7Z7K2 595 aaPredicted RBP11.42□□□□□ -0.58
LIG3-203ENST00000585370 NELFCDQ8IXH7 590 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 EXOC8Q8IYI6 725 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 TC2NQ8N9U0 490 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 ARRDC4Q8NCT1 418 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 MCPH1Q8NEM0 835 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 TMEM174Q8WUU8 243 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 SEPT1Q8WYJ6 367 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 KIFAP3Q92845 792 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 HVCN1Q96D96 273 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 BAG1Q99933 345 aaPredicted RBP11.42□□□□□ -0.58
LIG3-203ENST00000585370 MKNK1Q9BUB5 465 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 STRA6Q9BX79 667 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 EDEM3Q9BZQ6 932 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 NDST4Q9H3R1 872 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 NRBP2Q9NSY0 501 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 SLC5A4Q9NY91 659 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 DIS3Q9Y2L1 958 aaKnown RBP11.42□□□□□ -0.58
LIG3-203ENST00000585370 MAFBQ9Y5Q3 323 aaPredicted RBP11.42□□□□□ -0.58
LIG3-203ENST00000585370 ZNF236Q9UL36 1845 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 IGKV6D-21A0A0A0MT36 114 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 A0A1W2PQJ5 194 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 RSPH10B2B2RC85 870 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 ZSCAN12O43309 604 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 DGAT1O75907 488 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 PRPF6O94906 941 aaKnown RBP11.41□□□□□ -0.58
LIG3-203ENST00000585370 PGK2P07205 417 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 RSPH10BP0C881 870 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 RBL2Q08999 1139 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 MAPK7Q13164 816 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 METTL7BQ6UX53 244 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 SLC39A5Q6ZMH5 540 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 CYFIP1Q7L576 1253 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 TMTC1Q8IUR5 882 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 ZNF397Q8NF99 534 aaPredicted RBP11.41□□□□□ -0.58
LIG3-203ENST00000585370 SPIRE2Q8WWL2 714 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 ZNF302Q9NR11 478 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 MTMR10Q9NXD2 777 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 CAPN11Q9UMQ6 739 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 EXOC7Q9UPT5 735 aa11.41□□□□□ -0.58
LIG3-203ENST00000585370 LUC7L2Q9Y383 392 aaKnown RBP11.41□□□□□ -0.58
LIG3-203ENST00000585370 ASTN1O14525 1302 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 GOLGA6L9A6NEM1 432 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 SFI1A8K8P3 1242 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 BACH1O14867 736 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 MFAP3LO75121 409 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 PPP1R37O75864 691 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 STBD1O95210 358 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.58
LIG3-203ENST00000585370 MYBP10242 640 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 EPB41P11171 864 aaKnown RBP11.4□□□□□ -0.58
LIG3-203ENST00000585370 FECHP22830 423 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 NR2F2P24468 414 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 HSP90AA2PQ14568 343 aaPredicted RBP11.4□□□□□ -0.58
LIG3-203ENST00000585370 UGCGQ16739 394 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 ZNF792Q3KQV3 632 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 MIIPQ5JXC2 388 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 ANO5Q75V66 913 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 SLC9A9Q8IVB4 645 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 TRIM59Q8IWR1 403 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 GLIS3Q8NEA6 775 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 OR8K1Q8NGG5 319 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 AFAP1L1Q8TED9 768 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 FAM167AQ96KS9 214 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 CEP170P1Q96L14 293 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 ACCSQ96QU6 501 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 FIZ1Q96SL8 496 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 LBHD1Q9BQE6 289 aaPredicted RBP11.4□□□□□ -0.58
LIG3-203ENST00000585370 NTPCRQ9BSD7 190 aaKnown RBP11.4□□□□□ -0.58
LIG3-203ENST00000585370 NIFKQ9BYG3 293 aaKnown RBP11.4□□□□□ -0.58
LIG3-203ENST00000585370 FGFBP2Q9BYJ0 223 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 GBP3Q9H0R5 595 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 MLXIPQ9HAP2 919 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 DDX41Q9UJV9 622 aaKnown RBP11.4□□□□□ -0.58
LIG3-203ENST00000585370 ATP11BQ9Y2G3 1177 aa11.4□□□□□ -0.58
LIG3-203ENST00000585370 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.4□□□□□ -0.58
LIG3-203ENST00000585370 SYNGAP1Q96PV0 1343 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 IGSF9BQ9UPX0 1349 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 USO1O60763 962 aaKnown RBP11.39□□□□□ -0.59
LIG3-203ENST00000585370 NR3C1P04150 777 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 GYPCP04921 128 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 UBA1P22314 1058 aaKnown RBP11.39□□□□□ -0.59
LIG3-203ENST00000585370 NMT1P30419 496 aaKnown RBP11.39□□□□□ -0.59
LIG3-203ENST00000585370 CASP14P31944 242 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 HOXD13P35453 343 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 PSMC2P35998 433 aaKnown RBP11.39□□□□□ -0.59
LIG3-203ENST00000585370 RFC5P40937 340 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 ADCYAP1R1P41586 468 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 SLC26A2P50443 739 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms