RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 POU5F1BQ06416 359 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 LONRF3Q496Y0 759 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 ARSHQ5FYA8 562 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 KRBA2Q6ZNG9 492 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 TSHZ1Q6ZSZ6 1077 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 FAM43BQ6ZT52 329 aaPredicted RBP16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 DYMQ7RTS9 669 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 CCDC65Q8IXS2 484 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 FMR1NBQ8N0W7 255 aaPredicted RBP16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 ASAP3Q8TDY4 903 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 BADQ92934 168 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 SCLYQ96I15 445 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 OSMRQ99650 979 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 ADAMTS10Q9H324 1103 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 PARVGQ9HBI0 331 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 PHLPP2Q6ZVD8 1323 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 A0A087WZ62 844 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 NPHP3-ACAD11A0A0J9YXS1 232 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 MYMKA6NI61 221 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 CCDC169A6NNP5 214 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 GHRP10912 638 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 PLS3P13797 630 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 IDEP14735 1019 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 SCP2P22307 547 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 SFPQP23246 707 aaKnown RBP eCLIP16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 EIF4BP23588 611 aaKnown RBP16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 ABCD1P33897 745 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 AFMP43652 599 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 EFNA5P52803 228 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 ASIC1P78348 528 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 PAK2Q13177 524 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 CAPSQ13938 189 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 GIT2Q14161 759 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 FBXO47Q5MNV8 452 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 TRAF7Q6Q0C0 670 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 SRGAP1Q7Z6B7 1085 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 KSR1Q8IVT5 923 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 MYCT1Q8N699 235 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 SLC17A8Q8NDX2 589 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 SEPT8Q92599 483 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 STAMQ92783 540 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 APBB2Q92870 758 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 CCDC47Q96A33 483 aaKnown RBP16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 PAGE5Q96GU1 130 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 TIGD1Q96MW7 591 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 C7orf25Q9BPX7 421 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 FDXACB1Q9BRP7 624 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 NFKBIZQ9BYH8 718 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 TRIM9Q9C026 710 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 SEL1LQ9UBV2 794 aa16.12■□□□□ 0.17
SCAMP4-209ENST00000585335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 H0YGN5 161 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 GPR182O15218 404 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 GTPBP6O43824 516 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 RPS6KA5O75582 802 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 ACTN1P12814 892 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 DARSP14868 501 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 CSF2RAP15509 400 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 PTMSP20962 102 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 ITGB8P26012 769 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 PEX3P56589 373 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 MDM2Q00987 491 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 CACNB1Q02641 598 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 NCBP1Q09161 790 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 MAPK7Q13164 816 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 LPIN1Q14693 890 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 PCBP1Q15365 356 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 CNNM4Q6P4Q7 775 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 DEFB128Q7Z7B8 93 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 ENGASEQ8NFI3 743 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 ZNF668Q96K58 619 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 IL23AQ9NPF7 189 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 KMT5AQ9NQR1 393 aa16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 MKI67P46013 3256 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-209ENST00000585335 LTBP2Q14767 1821 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 SFI1A8K8P3 1242 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 INO80B-WBP1J3KQ70 363 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 NBNO60934 754 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 NR1I2O75469 434 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 ERLIN2O94905 339 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 CXCL10P02778 98 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 LIG1P18858 919 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 MAGEA10P43363 369 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 NPTX2P47972 431 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 ZNF131P52739 623 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 PTENP60484 403 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 SNW1Q13573 536 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 PSRC1Q6PGN9 363 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 IFNLR1Q8IU57 520 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 DAW1Q8N136 415 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 SPIRE2Q8WWL2 714 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 IFIH1Q9BYX4 1025 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 MTIF3Q9H2K0 278 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 CDHR5Q9HBB8 845 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 POLD4Q9HCU8 107 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 LMBRD1Q9NUN5 540 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 PANK4Q9NVE7 773 aa16.1■□□□□ 0.17
SCAMP4-209ENST00000585335 PVALEFA0A1B0GWK0 134 aa16.09■□□□□ 0.17
SCAMP4-209ENST00000585335 MBD3O95983 291 aa16.09■□□□□ 0.17
SCAMP4-209ENST00000585335 NFX1Q12986 1120 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms