RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 SHC4Q6S5L8 630 aa15.36■□□□□ 0.05
TRAF4-215ENST00000584944 SYT2Q8N9I0 419 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-215ENST00000584944 USP38Q8NB14 1042 aa15.36■□□□□ 0.05
TRAF4-215ENST00000584944 SEPT8Q92599 483 aa15.36■□□□□ 0.05
TRAF4-215ENST00000584944 CTAGE1Q96RT6 745 aa15.36■□□□□ 0.05
TRAF4-215ENST00000584944 KCNG1Q9UIX4 513 aa15.36■□□□□ 0.05
TRAF4-215ENST00000584944 UMODL1Q5DID0 1318 aa15.36■□□□□ 0.05
TRAF4-215ENST00000584944 CHD9Q3L8U1 2897 aa15.36■□□□□ 0.05
TRAF4-215ENST00000584944 A0A1B0GVL5 298 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 A0A1W2PQ27 194 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 A0A1W2PQ64 194 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 A0A1W2PQD8 194 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 LRRIQ4A6NIV6 560 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 FAM13AO94988 1023 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 GHRP10912 638 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 SFPQP23246 707 aaKnown RBP eCLIP15.35■□□□□ 0.05
TRAF4-215ENST00000584944 SYKP43405 635 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 CRYBB1P53674 252 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-215ENST00000584944 SMTNP53814 917 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 LAMTOR4Q0VGL1 99 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 DMP1Q13316 513 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-215ENST00000584944 MCM6Q14566 821 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 TMEM132AQ24JP5 1023 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 TRIM71Q2Q1W2 868 aaKnown RBP15.35■□□□□ 0.05
TRAF4-215ENST00000584944 ZNF410Q86VK4 478 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 ZBTB8OSQ8IWT0 167 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 DEPTORQ8TB45 409 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 WNT8BQ93098 351 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 OSMRQ99650 979 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 WNT8AQ9H1J5 351 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 MAGEF1Q9HAY2 307 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 CXXC1Q9P0U4 656 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-215ENST00000584944 USP25Q9UHP3 1055 aa15.35■□□□□ 0.05
TRAF4-215ENST00000584944 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-215ENST00000584944 IGKV6-21A0A0C4DH24 114 aa15.34■□□□□ 0.05
TRAF4-215ENST00000584944 CCDC169A6NNP5 214 aa15.34■□□□□ 0.05
TRAF4-215ENST00000584944 ZBBXA8MT70 800 aa15.34■□□□□ 0.05
TRAF4-215ENST00000584944 GPR182O15218 404 aa15.34■□□□□ 0.05
TRAF4-215ENST00000584944 RPS6KA5O75582 802 aa15.34■□□□□ 0.05
TRAF4-215ENST00000584944 FGBP02675 491 aa15.34■□□□□ 0.05
TRAF4-215ENST00000584944 CHRNA1P02708 482 aa15.34■□□□□ 0.05
TRAF4-215ENST00000584944 PFKFB1P16118 471 aa15.34■□□□□ 0.05
TRAF4-215ENST00000584944 NFX1Q12986 1120 aaKnown RBP15.34■□□□□ 0.05
TRAF4-215ENST00000584944 RINT1Q6NUQ1 792 aa15.34■□□□□ 0.05
TRAF4-215ENST00000584944 KCNK18Q7Z418 384 aa15.34■□□□□ 0.05
TRAF4-215ENST00000584944 RNF149Q8NC42 400 aa15.34■□□□□ 0.05
TRAF4-215ENST00000584944 ZNF668Q96K58 619 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-215ENST00000584944 RUSC1Q9BVN2 902 aa15.34■□□□□ 0.05
TRAF4-215ENST00000584944 IFIH1Q9BYX4 1025 aaKnown RBP15.34■□□□□ 0.05
TRAF4-215ENST00000584944 LARSQ9P2J5 1176 aaKnown RBP15.34■□□□□ 0.05
TRAF4-215ENST00000584944 HOOK1Q9UJC3 728 aaKnown RBP15.34■□□□□ 0.05
TRAF4-215ENST00000584944 HIP1RO75146 1068 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 ERLIN2O94905 339 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 KCNJ6P48051 423 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 GPC3P51654 580 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 SLC12A3P55017 1021 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 DRP2Q13474 957 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 IKBKEQ14164 716 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 FAM26DQ5JW98 314 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 TSHZ1Q6ZSZ6 1077 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 APBB2Q92870 758 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 VWCEQ96DN2 955 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 C2orf40Q9H1Z8 148 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 GPRC5CQ9NQ84 441 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 ODF2LQ9ULJ1 636 aa15.33■□□□□ 0.04
TRAF4-215ENST00000584944 A0A087WZ62 844 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 DENND3A2RUS2 1198 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 INO80B-WBP1J3KQ70 363 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 EFCAB14O75071 495 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 IDEP14735 1019 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 ZSCAN20P17040 1043 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-215ENST00000584944 LIG1P18858 919 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 EIF4BP23588 611 aaKnown RBP15.32■□□□□ 0.04
TRAF4-215ENST00000584944 GUCY2CP25092 1073 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 RAB30Q15771 203 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 FBXO47Q5MNV8 452 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 CNKSR3Q6P9H4 555 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 C1orf186Q6ZWK4 172 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 OTOP2Q7RTS6 562 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 DYMQ7RTS9 669 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 CATSPER4Q7RTX7 472 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 KSR1Q8IVT5 923 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 MYCT1Q8N699 235 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 CNNM3Q8NE01 707 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 CCDC47Q96A33 483 aaKnown RBP15.32■□□□□ 0.04
TRAF4-215ENST00000584944 CEP89Q96ST8 783 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 GAS2L1Q99501 681 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-215ENST00000584944 FDXACB1Q9BRP7 624 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-215ENST00000584944 TNMDQ9H2S6 317 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 PRDM12Q9H4Q4 367 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 C17orf75Q9HAS0 396 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 XPNPEP1Q9NQW7 623 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 MSRAQ9UJ68 235 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 SQORQ9Y6N5 450 aa15.32■□□□□ 0.04
TRAF4-215ENST00000584944 WDR81Q562E7 1941 aa15.31■□□□□ 0.04
TRAF4-215ENST00000584944 CHD7Q9P2D1 2997 aa15.31■□□□□ 0.04
TRAF4-215ENST00000584944 H0YCG3 227 aa15.31■□□□□ 0.04
TRAF4-215ENST00000584944 KINO60870 393 aaKnown RBP15.31■□□□□ 0.04
TRAF4-215ENST00000584944 GPR32O75388 356 aa15.31■□□□□ 0.04
TRAF4-215ENST00000584944 PRPF40AO75400 957 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms