RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 KCTD17Q8N5Z5 321 aa18.69■□□□□ 0.58
CSNK1D-225ENST00000584913 CCDC43Q96MW1 224 aaKnown RBP18.69■□□□□ 0.58
CSNK1D-225ENST00000584913 FDXACB1Q9BRP7 624 aaPredicted RBP18.69■□□□□ 0.58
CSNK1D-225ENST00000584913 TMEM117Q9H0C3 514 aa18.69■□□□□ 0.58
CSNK1D-225ENST00000584913 IFT122Q9HBG6 1241 aa18.69■□□□□ 0.58
CSNK1D-225ENST00000584913 MTUS1Q9ULD2 1270 aa18.69■□□□□ 0.58
CSNK1D-225ENST00000584913 MYO9BQ13459 2157 aa18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 SPATA31C1P0DKV0 1188 aa18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 GJB2P29033 226 aa18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 ANP32AP39687 249 aaKnown RBP18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 MRPS5P82675 430 aaKnown RBP18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 CUL4AQ13619 759 aa18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 FERMT3Q86UX7 667 aa18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 C4orf32Q8N8J7 132 aa18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 NACC1Q96RE7 527 aa18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 PPP1R16BQ96T49 567 aa18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 AAASQ9NRG9 546 aa18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 SMC3Q9UQE7 1217 aa18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 MRPL42Q9Y6G3 142 aaKnown RBP18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 PRUNE2Q8WUY3 3088 aa18.68■□□□□ 0.58
CSNK1D-225ENST00000584913 FNDC1Q4ZHG4 1894 aaPredicted RBP18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 NCK2O43639 380 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 UBE3AQ05086 875 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 LAMTOR4Q0VGL1 99 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 TFDP1Q14186 410 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 COL19A1Q14993 1142 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 ZNF598Q86UK7 904 aaKnown RBP18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 CATSPER3Q86XQ3 398 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 ECHDC2Q86YB7 292 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 IGSF22Q8N9C0 903 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 ZNF579Q8NAF0 562 aaKnown RBP18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 MCPH1Q8NEM0 835 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 PRPF31Q8WWY3 499 aaKnown RBP18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 ASB2Q96Q27 587 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 SH2D3AQ9BRG2 576 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 XPNPEP1Q9NQW7 623 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 AGPAT5Q9NUQ2 364 aa18.67■□□□□ 0.58
CSNK1D-225ENST00000584913 KIAA1671Q9BY89 1806 aa18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 ZNF623O75123 536 aa18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 ATP2B1P20020 1258 aa18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 AXLP30530 894 aa18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 PHKA2P46019 1235 aa18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 TOB1P50616 345 aaPredicted RBP18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 ZNF174Q15697 407 aa18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 CCDC85BQ15834 202 aaPredicted RBP18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 PPM1EQ8WY54 764 aa18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 CCDC51Q96ER9 411 aa18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 NLRP4Q96MN2 994 aa18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 MRPL9Q9BYD2 267 aaKnown RBP18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 SPTBN5Q9NRC6 3674 aaKnown RBP18.66■□□□□ 0.58
CSNK1D-225ENST00000584913 PRRC2BQ5JSZ5 2229 aaKnown RBP18.65■□□□□ 0.58
CSNK1D-225ENST00000584913 FSD2A1L4K1 749 aa18.65■□□□□ 0.58
CSNK1D-225ENST00000584913 H3BQV1 296 aa18.65■□□□□ 0.58
CSNK1D-225ENST00000584913 LAG3P18627 525 aa18.65■□□□□ 0.58
CSNK1D-225ENST00000584913 PDCP20941 246 aa18.65■□□□□ 0.58
CSNK1D-225ENST00000584913 ARL2P36404 184 aa18.65■□□□□ 0.58
CSNK1D-225ENST00000584913 TECP42680 631 aa18.65■□□□□ 0.58
CSNK1D-225ENST00000584913 CATSPER4Q7RTX7 472 aa18.65■□□□□ 0.58
CSNK1D-225ENST00000584913 LRRC43Q8N309 656 aa18.65■□□□□ 0.58
CSNK1D-225ENST00000584913 MICALL1Q8N3F8 863 aa18.65■□□□□ 0.58
CSNK1D-225ENST00000584913 HLA-CQ95604 372 aa18.65■□□□□ 0.58
CSNK1D-225ENST00000584913 NSUN3Q9H649 340 aaKnown RBP18.65■□□□□ 0.58
CSNK1D-225ENST00000584913 SLC26A4O43511 780 aa18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 PTENP60484 403 aa18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 PTGDRQ13258 359 aa18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 ARL6IP4Q66PJ3 421 aaKnown RBP18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 BRAPQ7Z569 592 aa18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 ABI1Q8IZP0 508 aa18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 CNNM3Q8NE01 707 aa18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 TMEM143Q96AN5 459 aa18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 INTS4Q96HW7 963 aaKnown RBP18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 LRWD1Q9UFC0 647 aa18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 PIN4Q9Y237 131 aaKnown RBP18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 LZTS1Q9Y250 596 aa18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 PCDHB6Q9Y5E3 794 aa18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 PCDHB12Q9Y5F1 795 aa18.64■□□□□ 0.57
CSNK1D-225ENST00000584913 TBKBP1A7MCY6 615 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 ZBTB39O15060 712 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 MED24O75448 989 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 BMP15O95972 392 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 ATF7P17544 494 aaPredicted RBP18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 PPM1AP35813 382 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 ATP2C1P98194 919 aaPredicted RBP18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 PDE12Q6L8Q7 609 aaKnown RBP18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 KSR1Q8IVT5 923 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 RNF149Q8NC42 400 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 PPP2R3CQ969Q6 453 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 CASD1Q96PB1 797 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 RNF19AQ9NV58 838 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 PLAGL2Q9UPG8 496 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 CNTNAP2Q9UHC6 1331 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 ZMYM2Q9UBW7 1377 aa18.63■□□□□ 0.57
CSNK1D-225ENST00000584913 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.62■□□□□ 0.57
CSNK1D-225ENST00000584913 DLL1O00548 723 aa18.62■□□□□ 0.57
CSNK1D-225ENST00000584913 PLCB3Q01970 1234 aa18.62■□□□□ 0.57
CSNK1D-225ENST00000584913 SKIV2LQ15477 1246 aaKnown RBP18.62■□□□□ 0.57
CSNK1D-225ENST00000584913 PAN2Q504Q3 1202 aaKnown RBP18.62■□□□□ 0.57
CSNK1D-225ENST00000584913 FAM102BQ5T8I3 360 aa18.62■□□□□ 0.57
CSNK1D-225ENST00000584913 LARP1BQ659C4 914 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms