RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 SPTLC1O15269 473 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 KRT16P08779 473 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 METAP2P50579 478 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 NCALDP61601 193 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 SAFBQ15424 915 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 HSP90AA4PQ58FG1 418 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 UBE2Q1Q7Z7E8 422 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 MICU3Q86XE3 530 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PDCD7Q8N8D1 485 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 RAPGEF5Q92565 580 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 CGREF1Q99674 301 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 HNRNPABQ99729 332 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 CTTNBP2NLQ9P2B4 639 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 SLC12A6Q9UHW9 1150 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 STK38LQ9Y2H1 464 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 DOCK2Q92608 1830 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 SOCS7O14512 581 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PPP6R2O75170 966 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 MSL3P1P0C860 447 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 S100A1P23297 94 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PRELPP51888 382 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 ARHGEF6Q15052 776 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PTPAQ15257 358 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 DACT2Q5SW24 774 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 IQCEQ6IPM2 695 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 C11orf74Q86VG3 221 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 USP40Q9NVE5 1235 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 ANGEL1Q9UNK9 670 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 TSC22D4Q9Y3Q8 395 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 ZMYM6O95789 1325 aa12.81□□□□□ -0.36
CDK5RAP3-232ENST00000584168 COL4A5P29400 1685 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 SCN9AQ15858 1988 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 IQCA1LA6NCM1 817 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PSMD14O00487 310 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 ENC1O14682 589 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 SRGAP2O75044 1071 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 MTRF1O75570 445 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 TUFMP49411 452 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 TMEM67Q5HYA8 995 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 METTL16Q86W50 562 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 RTKN2Q8IZC4 609 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 SUPT20HQ8NEM7 779 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 SNED1Q8TER0 1413 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 CASP10Q92851 521 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 BHMT2Q9H2M3 363 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 NKX1-2Q9UD57 310 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 TTI1O43156 1089 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PAEPP09466 180 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 CDC27P30260 824 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 C2orf54Q08AI8 447 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 SHROOM1Q2M3G4 852 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.8□□□□□ -0.361e-6■□□□□ 10.2
CDK5RAP3-232ENST00000584168 FOXP4Q8IVH2 680 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 TTC39CQ8N584 583 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 IFT81Q8WYA0 676 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 MAP3K14Q99558 947 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 AASDHPPTQ9NRN7 309 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 DMGDHQ9UI17 866 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PCDHA5Q9Y5H7 936 aa12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PDS5AQ29RF7 1337 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-232ENST00000584168 hCG_1642624A0A1W2PR95 340 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 CLRN2A0PK11 232 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 USP17L3A6NCW0 530 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 USP17L4A6NCW7 530 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 SLC26A4O43511 780 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 CALB2P22676 271 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 TMOD1P28289 359 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PPIDQ08752 370 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 ITIH4Q14624 930 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 ALX1Q15699 326 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 SEPT7Q16181 437 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 SH3D19Q5HYK7 790 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 RESP18Q5W5W9 173 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PHLDB3Q6NSJ2 640 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 USP17L1Q7RTZ2 530 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 TRPM8Q7Z2W7 1104 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PODNQ7Z5L7 613 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 CLEC10AQ8IUN9 316 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 GABPB2Q8TAK5 448 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 IRGQQ8WZA9 623 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 TUBGCP5Q96RT8 1024 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 SEZ6LQ9BYH1 1024 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 TDRD3Q9H7E2 651 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 RASAL2Q9UJF2 1139 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PLAAQ9Y263 795 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 FAM205AQ6ZU69 1335 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 WDR19Q8NEZ3 1342 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 ADAMTSL1Q8N6G6 1762 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 CRKP46108 304 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 PPARDQ03181 441 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 EIF2B5Q13144 721 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 MIGA2Q7L4E1 593 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 CYP4X1Q8N118 509 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 RNF10Q8N5U6 811 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 KLHL29Q96CT2 875 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 MAELQ96JY0 434 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 FHDC1Q9C0D6 1143 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 ECT2Q9H8V3 914 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 RNPEPL1Q9HAU8 725 aa12.79□□□□□ -0.36
CDK5RAP3-232ENST00000584168 TBCCD1Q9NVR7 557 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms