RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 SLFN12LQ6IEE8 588 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 FAM126AQ9BYI3 521 aaPredicted RBP5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 ZDHHC5Q9C0B5 715 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 NR2E1Q9Y466 385 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 SPEF1Q9Y4P9 236 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 WASHC2CQ9Y4E1 1318 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 A0A0G2JNJ9 132 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 MUSKO15146 869 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 PRPF6O94906 941 aaKnown RBP5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 FSHBP01225 129 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 ETV4P43268 484 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 BCAR1P56945 870 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 EXOSC10Q01780 885 aaKnown RBP5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 MYBPC3Q14896 1274 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 HS1BP3Q53T59 392 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 TMEM200BQ69YZ2 307 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 TRIM68Q6AZZ1 485 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 RPUSD2Q8IZ73 545 aaKnown RBP5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 C7orf31Q8N865 590 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 DPYSL5Q9BPU6 564 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 KIAA1683Q9H0B3 1180 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 C12orf65Q9H3J6 166 aaKnown RBP5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 SEMA4AQ9H3S1 761 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 Q9UFV3 132 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 MSRAQ9UJ68 235 aa5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 ZFR2Q9UPR6 939 aaKnown RBP5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 NOC2LQ9Y3T9 749 aaKnown RBP5.43□□□□□ -1.54
PPP4R1-227ENST00000583988 CDC14BO60729 498 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 HMGB1P09429 215 aaKnown RBP5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 CDKN1CP49918 316 aaPredicted RBP5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 GUCY2FP51841 1108 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 TMPRSS15P98073 1019 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 ADCY2Q08462 1091 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 SPDYAQ5MJ70 313 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 GRAMD4Q6IC98 578 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 KIAA1841Q6NSI8 718 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 LHFPL2Q6ZUX7 228 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 ESPNLQ6ZVH7 1005 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 LARP4Q71RC2 724 aaKnown RBP eCLIP5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 BCL6BQ8N143 479 aaPredicted RBP5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 RSAD2Q8WXG1 361 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 ACAP3Q96P50 834 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 MYL10Q9BUA6 226 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 POFUT1Q9H488 388 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 KCMF1Q9P0J7 381 aa5.42□□□□□ -1.54
PPP4R1-227ENST00000583988 ELL2O00472 640 aaPredicted RBP5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 C6P13671 934 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 CR2P20023 1033 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 MAP3K12Q12852 859 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 PRAMEF9Q5VWM5 478 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 UNQ6494/PRO21346Q6UXR6 183 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 FUKQ8N0W3 1084 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 CLRN3Q8NCR9 226 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 RPGRQ92834 1020 aaKnown RBP5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 OR14A2Q96R54 314 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 ADOQ96SZ5 270 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 PITHD1Q9GZP4 211 aaPredicted RBP5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 MS4A5Q9H3V2 200 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 DDX56Q9NY93 547 aaKnown RBP5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 DENND2AQ9ULE3 1009 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 FAM184BQ9ULE4 1060 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 OAZ3Q9UMX2 235 aa5.41□□□□□ -1.54
PPP4R1-227ENST00000583988 LCHNA4D1U4 455 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 AKAP8O43823 692 aaKnown RBP5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 AMHP03971 560 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 PDGFRBP09619 1106 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 MEOX1P50221 254 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 ANTXR2P58335 489 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 KRT85P78386 507 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 R3HDM1Q15032 1099 aaKnown RBP5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 TBR1Q16650 682 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 HDGFL2Q7Z4V5 671 aaPredicted RBP5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 BMP8AQ7Z5Y6 402 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 RTKN2Q8IZC4 609 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 SLC16A11Q8NCK7 471 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 AHCYL2Q96HN2 611 aaKnown RBP5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 ORAI2Q96SN7 254 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 HAPLN2Q9GZV7 340 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 TOPORSQ9NS56 1045 aaPredicted RBP5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 PUF60Q9UHX1 559 aaKnown RBP5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 NUMBLQ9Y6R0 609 aa5.4□□□□□ -1.54
PPP4R1-227ENST00000583988 A0A0A6YYJ9 748 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 PRSS38A1L453 326 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 MATN2O00339 956 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 ARHGAP6O43182 974 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 PRKD3O94806 890 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 APOL3O95236 402 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 TACR2P21452 398 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 COMTP21964 271 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 GPR15P49685 360 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 MRE11P49959 708 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 STAT5BP51692 787 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 ERVK-21P61565 698 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 PCOLCEQ15113 449 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 PDCD1Q15116 288 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 PRKD1Q15139 912 aaPredicted RBP5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 DGKDQ16760 1214 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 CCDC178Q5BJE1 867 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 AGBL4Q5VU57 503 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 USP30Q70CQ3 517 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms