RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 LRRC2Q9BYS8 371 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 RNF41Q9H4P4 317 aaPredicted RBP13.01□□□□□ -0.33
NUP85-224ENST00000583948 C1orf112Q9NSG2 853 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 USP18Q9UMW8 372 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 LIMCH1Q9UPQ0 1083 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.01□□□□□ -0.33
NUP85-224ENST00000583948 KDM3AQ9Y4C1 1321 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 ZFYVE26Q68DK2 2539 aa13□□□□□ -0.33
NUP85-224ENST00000583948 PNMA6FA0A0J9YX94 578 aa13□□□□□ -0.33
NUP85-224ENST00000583948 MEIS3P2A8K0S8 358 aa13□□□□□ -0.33
NUP85-224ENST00000583948 DDX39AO00148 427 aaKnown RBP13□□□□□ -0.33
NUP85-224ENST00000583948 SPATA31D3P0C874 917 aa13□□□□□ -0.33
NUP85-224ENST00000583948 CD72P21854 359 aa13□□□□□ -0.33
NUP85-224ENST00000583948 CSTF1Q05048 431 aaKnown RBP13□□□□□ -0.33
NUP85-224ENST00000583948 GRM4Q14833 912 aa13□□□□□ -0.33
NUP85-224ENST00000583948 LETM2Q2VYF4 491 aa13□□□□□ -0.33
NUP85-224ENST00000583948 PPM1JQ5JR12 505 aa13□□□□□ -0.33
NUP85-224ENST00000583948 SPATA31D4Q6ZUB0 917 aa13□□□□□ -0.33
NUP85-224ENST00000583948 OTOP3Q7RTS5 596 aa13□□□□□ -0.33
NUP85-224ENST00000583948 ECHDC2Q86YB7 292 aa13□□□□□ -0.33
NUP85-224ENST00000583948 CMTR1Q8N1G2 835 aaKnown RBP13□□□□□ -0.33
NUP85-224ENST00000583948 LPPQ93052 612 aa13□□□□□ -0.33
NUP85-224ENST00000583948 PGBD1Q96JS3 809 aa13□□□□□ -0.33
NUP85-224ENST00000583948 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
NUP85-224ENST00000583948 WNT16Q9UBV4 365 aa13□□□□□ -0.33
NUP85-224ENST00000583948 CDV3Q9UKY7 258 aaKnown RBP13□□□□□ -0.33
NUP85-224ENST00000583948 MIA3Q5JRA6 1907 aa13□□□□□ -0.33
NUP85-224ENST00000583948 ZBTB42B2RXF5 422 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 PRC1O43663 620 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 KINO60870 393 aaKnown RBP12.99□□□□□ -0.33
NUP85-224ENST00000583948 ZC3H11AO75152 810 aaKnown RBP eCLIP12.99□□□□□ -0.33
NUP85-224ENST00000583948 GPR32O75388 356 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 RFPL2O75678 378 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 STAM2O75886 525 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 LARGE1O95461 756 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 MCM5P33992 734 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 STAT5BP51692 787 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 ACTR2P61160 394 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 MTMR1Q13613 665 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 TOB2Q14106 344 aaPredicted RBP12.99□□□□□ -0.33
NUP85-224ENST00000583948 MB21D2Q8IYB1 491 aaPredicted RBP12.99□□□□□ -0.33
NUP85-224ENST00000583948 LRRC43Q8N309 656 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 TMEM87AQ8NBN3 555 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 ZSCAN31Q96LW9 406 aaPredicted RBP12.99□□□□□ -0.33
NUP85-224ENST00000583948 UBAC1Q9BSL1 405 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 MYL10Q9BUA6 226 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 DNAJB4Q9UDY4 337 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 NAP1L2Q9ULW6 460 aaPredicted RBP12.99□□□□□ -0.33
NUP85-224ENST00000583948 UBIAD1Q9Y5Z9 338 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 ANKRD11Q6UB99 2663 aaPredicted RBP12.99□□□□□ -0.33
NUP85-224ENST00000583948 PATJQ8NI35 1801 aa12.99□□□□□ -0.33
NUP85-224ENST00000583948 C2CD2LO14523 706 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 GPR182O15218 404 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 ATP4AP20648 1035 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 CLCN3P51790 818 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 EXOSC10Q01780 885 aaKnown RBP12.98□□□□□ -0.33
NUP85-224ENST00000583948 ITGB3BPQ13352 177 aaPredicted RBP12.98□□□□□ -0.33
NUP85-224ENST00000583948 SNW1Q13573 536 aaKnown RBP12.98□□□□□ -0.33
NUP85-224ENST00000583948 PTPN14Q15678 1187 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 ZC3H14Q6PJT7 736 aaKnown RBP12.98□□□□□ -0.33
NUP85-224ENST00000583948 ABI1Q8IZP0 508 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 SAMD3Q8N6K7 520 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 PJA1Q8NG27 643 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 BRF1Q92994 677 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 GPRASP2Q96D09 838 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 KLHL5Q96PQ7 755 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 KRT23Q9C075 422 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 GBP3Q9H0R5 595 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 AZI2Q9H6S1 392 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 CNNM2Q9H8M5 875 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 JPH1Q9HDC5 661 aaPredicted RBP12.98□□□□□ -0.33
NUP85-224ENST00000583948 ARHGEF3Q9NR81 526 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 SH2B1Q9NRF2 756 aaPredicted RBP12.98□□□□□ -0.33
NUP85-224ENST00000583948 DZANK1Q9NVP4 752 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 SPATA6Q9NWH7 488 aaPredicted RBP12.98□□□□□ -0.33
NUP85-224ENST00000583948 SLC9A2Q9UBY0 812 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 TPCN1Q9ULQ1 816 aa12.98□□□□□ -0.33
NUP85-224ENST00000583948 FASNP49327 2511 aaKnown RBP12.97□□□□□ -0.33
NUP85-224ENST00000583948 GDF9O60383 454 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 CCNE2O96020 404 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 CNPP09543 421 aaKnown RBP12.97□□□□□ -0.33
NUP85-224ENST00000583948 PCP11498 1178 aaKnown RBP12.97□□□□□ -0.33
NUP85-224ENST00000583948 KLRC2P26717 231 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 PPM1AP35813 382 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 CLCN4P51793 760 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 SPEM2Q0P670 501 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 STK3Q13188 491 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 CUL4AQ13619 759 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 DCLRE1AQ6PJP8 1040 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 TAS1R1Q7RTX1 841 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 CCDC83Q8IWF9 413 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 NME8Q8N427 588 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 METTL13Q8N6R0 699 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 GIMAP8Q8ND71 665 aaPredicted RBP12.97□□□□□ -0.33
NUP85-224ENST00000583948 TMEM169Q96HH4 297 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 ELAC1Q9H777 363 aaKnown RBP12.97□□□□□ -0.33
NUP85-224ENST00000583948 NRDE2Q9H7Z3 1164 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 SFXN1Q9H9B4 322 aa12.97□□□□□ -0.33
NUP85-224ENST00000583948 SMG5Q9UPR3 1016 aaKnown RBP12.97□□□□□ -0.33
NUP85-224ENST00000583948 MYH15Q9Y2K3 1946 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 262.4 ms