RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 HVCN1Q96D96 273 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 DNAJC19Q96DA6 116 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 CCDC51Q96ER9 411 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 PAGE5Q96GU1 130 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 GSDMAQ96QA5 445 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 PLIN2Q99541 437 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 RUSC1Q9BVN2 902 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 TRIM9Q9C026 710 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 FAM49AQ9H0Q0 323 aaPredicted RBP10.3□□□□□ -0.76
UBBP4-201ENST00000583708 ADAMTS10Q9H324 1103 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 RMND1Q9NWS8 449 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 SERTAD1Q9UHV2 236 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 PCDHB13Q9Y5F0 798 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 WDR81Q562E7 1941 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 DNAH12Q6ZR08 3092 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 TMEM150BA6NC51 233 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 MYMKA6NI61 221 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 HIP1RO75146 1068 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 CHRNA1P02708 482 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 ACTN1P12814 892 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 DARSP14868 501 aaKnown RBP10.29□□□□□ -0.76
UBBP4-201ENST00000583708 SFPQP23246 707 aaKnown RBP eCLIP10.29□□□□□ -0.76
UBBP4-201ENST00000583708 GLRA2P23416 452 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 PPP1R2P41236 205 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 CLCN3P51790 818 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 SNRPFP62306 86 aaKnown RBP10.29□□□□□ -0.76
UBBP4-201ENST00000583708 MDM2Q00987 491 aaPredicted RBP10.29□□□□□ -0.76
UBBP4-201ENST00000583708 MLLT1Q03111 559 aaPredicted RBP10.29□□□□□ -0.76
UBBP4-201ENST00000583708 KCNB1Q14721 858 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 CDCA2Q69YH5 1023 aaPredicted RBP10.29□□□□□ -0.76
UBBP4-201ENST00000583708 TSHZ1Q6ZSZ6 1077 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 UNC13DQ70J99 1090 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 RHPN2Q8IUC4 686 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 DEPTORQ8TB45 409 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 NLRP7Q8WX94 980 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 SEPT8Q92599 483 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 TMEM143Q96AN5 459 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 CHAMP1Q96JM3 812 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 REEP2Q9BRK0 252 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 TRAIPQ9BWF2 469 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 POLR3FQ9H1D9 316 aaPredicted RBP10.29□□□□□ -0.76
UBBP4-201ENST00000583708 PRMT7Q9NVM4 692 aaPredicted RBP10.29□□□□□ -0.76
UBBP4-201ENST00000583708 CDY2AQ9Y6F7 541 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 BRCA2P51587 3418 aa10.29□□□□□ -0.76
UBBP4-201ENST00000583708 A0A087WWV3 80 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 ABHD14A-ACY1A0A1B0GW23 586 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 TRIM43BA6NCK2 446 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 K7ERI5 159 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 TRAK2O60296 914 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 GADD45BO75293 160 aaPredicted RBP10.28□□□□□ -0.76
UBBP4-201ENST00000583708 NR1I2O75469 434 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 RPS6KA5O75582 802 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 BAIAP3O94812 1187 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 VTNP04004 478 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 SRGAP2CP0DJJ0 459 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 SKIP12755 728 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 MAPK7Q13164 816 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 DHX8Q14562 1220 aaKnown RBP10.28□□□□□ -0.76
UBBP4-201ENST00000583708 POSTNQ15063 836 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 MAPK6Q16659 721 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 PLEKHG4Q58EX7 1191 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 HERC4Q5GLZ8 1057 aaPredicted RBP10.28□□□□□ -0.76
UBBP4-201ENST00000583708 FBXO47Q5MNV8 452 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 PSRC1Q6PGN9 363 aaPredicted RBP10.28□□□□□ -0.76
UBBP4-201ENST00000583708 TRAF7Q6Q0C0 670 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 PPP4R3CPQ6ZMV5 832 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 FAM178BQ8IXR5 827 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 C7orf61Q8IZ16 206 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 DAW1Q8N136 415 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 MYCT1Q8N699 235 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 RNF149Q8NC42 400 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 SPATA20Q8TB22 786 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 SYAP1Q96A49 352 aaPredicted RBP10.28□□□□□ -0.76
UBBP4-201ENST00000583708 TRIM43Q96BQ3 446 aaPredicted RBP10.28□□□□□ -0.76
UBBP4-201ENST00000583708 SCLT1Q96NL6 688 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 MTIF3Q9H2K0 278 aaKnown RBP10.28□□□□□ -0.76
UBBP4-201ENST00000583708 GOLPH3LQ9H4A5 285 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 IFT122Q9HBG6 1241 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 IL23AQ9NPF7 189 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 KMT5AQ9NQR1 393 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 PRDM5Q9NQX1 630 aaPredicted RBP10.28□□□□□ -0.76
UBBP4-201ENST00000583708 PANK4Q9NVE7 773 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 DACT1Q9NYF0 836 aa10.28□□□□□ -0.76
UBBP4-201ENST00000583708 CGNQ9P2M7 1197 aaKnown RBP10.28□□□□□ -0.76
UBBP4-201ENST00000583708 A0A087WZ62 844 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 LRRIQ4A6NIV6 560 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 ACKR2O00590 384 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 LIG1P18858 919 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 CYP2C18P33260 490 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 BMP8BP34820 402 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 NPTX2P47972 431 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 NCKAP1LP55160 1127 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 PEX3P56589 373 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 ASIC1P78348 528 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 GTF2BQ00403 316 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 FPGSQ05932 587 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 DPYDQ12882 1025 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 STRN3Q13033 797 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 CAPSQ13938 189 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 IKBKEQ14164 716 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms