RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 DNM2P50570 870 aa18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 LRSAM1Q6UWE0 723 aa18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SFR1Q86XK3 245 aa18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 BSNDQ8WZ55 320 aa18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 FIZ1Q96SL8 496 aa18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 NTPCRQ9BSD7 190 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 STARD7Q9NQZ5 370 aa18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 TBC1D7Q9P0N9 293 aa18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 LARSQ9P2J5 1176 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SUCLA2Q9P2R7 463 aaPredicted RBP18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 STXBP5LQ9Y2K9 1186 aa18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SMIM35A0A1B0GVV1 85 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 ASAP2O43150 1006 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 GLRA2P23416 452 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 TMOD1P28289 359 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 FAM26FQ5R3K3 315 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 ODR4Q5SWX8 454 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 GDF6Q6KF10 455 aaPredicted RBP18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 ZNF720Q7Z2F6 126 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 KIAA0319LQ8IZA0 1049 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 KIAA0895Q8NCT3 520 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 ASAP3Q8TDY4 903 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SPIRE2Q8WWL2 714 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 PRPF31Q8WWY3 499 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 IFT74Q96LB3 600 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SEZ6LQ9BYH1 1024 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SLC39A2Q9NP94 309 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 OLFML3Q9NRN5 406 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 ANO10Q9NW15 660 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 GDAQ9Y2T3 454 aa18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 LAMA2P24043 3122 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-228ENST00000583363 CUL9Q8IWT3 2517 aa18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 EVPLQ92817 2033 aa18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 A0A0U1RQG5 324 aaPredicted RBP18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 ARVCFO00192 962 aa18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 CYP2C9P11712 490 aa18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 NPTX2P47972 431 aa18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 CLCN3P51790 818 aa18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 PEX3P56589 373 aa18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 MXD4Q14582 209 aaPredicted RBP18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 STX1AQ16623 288 aa18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 COBLL1Q53SF7 1204 aa18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 FAM47CQ5HY64 1035 aa18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 FAM178BQ8IXR5 827 aa18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 MLKLQ8NB16 471 aa18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 PSPC1Q8WXF1 523 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 MRPL44Q9H9J2 332 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-228ENST00000583363 TRIP12Q14669 1992 aaPredicted RBP18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 UNC80Q8N2C7 3258 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 PPP1R3GB7ZBB8 358 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 NMT1P30419 496 aaKnown RBP18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 PRCPP42785 496 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 CDK7P50613 346 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SMTNP53814 917 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 LAMTOR4Q0VGL1 99 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 DMP1Q13316 513 aaPredicted RBP18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 PPP2R5AQ15172 486 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 DPCR1Q3MIW9 517 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 RUFY4Q6ZNE9 571 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 EPM2AIP1Q7L775 607 aaPredicted RBP18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SMYD4Q8IYR2 804 aaPredicted RBP18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 GLIS3Q8NEA6 775 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 STRA6Q9BX79 667 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 FGFBP2Q9BYJ0 223 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 ST6GALNAC4Q9H4F1 302 aa18.04■□□□□ 0.48
CDK5RAP3-228ENST00000583363 MYH11P35749 1972 aa18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 CCDC169A6NNP5 214 aa18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 CD44P16070 742 aaKnown RBP18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 NAMPTP43490 491 aa18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 NCKAP1LP55160 1127 aa18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 TAF2Q6P1X5 1199 aa18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 RHPN2Q8IUC4 686 aa18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 KSR1Q8IVT5 923 aa18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 ADSSL1Q8N142 457 aa18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 NME8Q8N427 588 aa18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 ZNF507Q8TCN5 953 aa18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 CTAGE1Q96RT6 745 aa18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SENP6Q9GZR1 1112 aaPredicted RBP18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 KMT5AQ9NQR1 393 aa18.03■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SLC16A4O15374 487 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SRGAP2CP0DJJ0 459 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 MYBP10242 640 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 CASP5P51878 434 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 GTF2BQ00403 316 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 CDC42EP1Q00587 391 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 POU5F1BQ06416 359 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 CAPSQ13938 189 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 PTGISQ16647 500 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 CT47A1Q5JQC4 288 aaPredicted RBP18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 HAUS6Q7Z4H7 955 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SERINC5Q86VE9 423 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 TMEM161BQ8NDZ6 487 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SCFD1Q8WVM8 642 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 DNAJB3Q8WWF6 145 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 KCNN1Q92952 543 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 MAP7D2Q96T17 732 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 FAM49AQ9H0Q0 323 aaPredicted RBP18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 TSPY26PQ9H489 355 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 MAPK8IP1Q9UQF2 711 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 AKT3Q9Y243 479 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms