RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 RBM28Q9NW13 759 aaKnown RBP13.92□□□□□ -0.18
TOP3A-215ENST00000583328 PCDHA10Q9Y5I2 948 aa13.92□□□□□ -0.18
TOP3A-215ENST00000583328 V9GY48 417 aaPredicted RBP13.92□□□□□ -0.18
TOP3A-215ENST00000583328 CARNS1A5YM72 827 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 RFX1P22670 979 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 CLK2P49760 499 aaKnown RBP13.91□□□□□ -0.18
TOP3A-215ENST00000583328 GPC3P51654 580 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 COL9A3Q14050 684 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-215ENST00000583328 GPR149Q86SP6 731 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 DDX53Q86TM3 631 aaKnown RBP13.91□□□□□ -0.18
TOP3A-215ENST00000583328 TMEM173Q86WV6 379 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-215ENST00000583328 SMAP1Q8IYB5 467 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-215ENST00000583328 LINC01465Q8N7H1 131 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 FEZF2Q8TBJ5 459 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 NLRP7Q8WX94 980 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 IGSF21Q96ID5 467 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 SFXN1Q9H9B4 322 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 KCNK12Q9HB15 430 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 DUSP12Q9UNI6 340 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 SAMM50Q9Y512 469 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 IRAK3Q9Y616 596 aa13.91□□□□□ -0.18
TOP3A-215ENST00000583328 CNTNAP5Q8WYK1 1306 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 GVINP1Q7Z2Y8 2422 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 IGLV3-22A0A075B6J6 115 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 hCG_1984214I3L0E3 225 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 SLC27A2O14975 620 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 CSDE1O75534 798 aaKnown RBP13.9□□□□□ -0.18
TOP3A-215ENST00000583328 LMNAP02545 664 aaKnown RBP13.9□□□□□ -0.18
TOP3A-215ENST00000583328 CYP3A4P08684 503 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 KLRC2P26717 231 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 LONRF3Q496Y0 759 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 SGMS1Q86VZ5 419 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 ZNF713Q8N859 430 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-215ENST00000583328 EMILIN2Q9BXX0 1053 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 SEMA4AQ9H3S1 761 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 NRDE2Q9H7Z3 1164 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 CHST12Q9NRB3 414 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 BARHL2Q9NY43 387 aa13.9□□□□□ -0.18
TOP3A-215ENST00000583328 GALTP07902 379 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 PHKA2P46019 1235 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 SETQ01105 290 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-215ENST00000583328 RNASELQ05823 741 aaKnown RBP13.89□□□□□ -0.19
TOP3A-215ENST00000583328 RTN1Q16799 776 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 GLB1LQ6UWU2 654 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 DGLUCYQ7Z3D6 616 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 RSPH1Q8WYR4 309 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 LPPQ93052 612 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 RMDN1Q96DB5 314 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 KLHL5Q96PQ7 755 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 GCOM2Q9BZD3 368 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-215ENST00000583328 GBP3Q9H0R5 595 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 IGSF9Q9P2J2 1179 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 INPP5FQ9Y2H2 1132 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 EVPLQ92817 2033 aa13.89□□□□□ -0.19
TOP3A-215ENST00000583328 MYO15AQ9UKN7 3530 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 EP300Q09472 2414 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-215ENST00000583328 WDR64B1ANS9 1081 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 NARSO43776 548 aaKnown RBP13.88□□□□□ -0.19
TOP3A-215ENST00000583328 OATP04181 439 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 SSBP05455 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
TOP3A-215ENST00000583328 CFHP08603 1231 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 SKIP12755 728 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 TBC1D8BQ0IIM8 1120 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 NONOQ15233 471 aaKnown RBP eCLIP13.88□□□□□ -0.19
TOP3A-215ENST00000583328 PTPN14Q15678 1187 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 LETM2Q2VYF4 491 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 PRR16Q569H4 304 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 NOMO2Q5JPE7 1267 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 CREB3L3Q68CJ9 461 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 TWF2Q6IBS0 349 aaKnown RBP13.88□□□□□ -0.19
TOP3A-215ENST00000583328 APOA5Q6Q788 366 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 KIAA2013Q8IYS2 634 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 BCL7CQ8WUZ0 217 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-215ENST00000583328 HINFPQ9BQA5 517 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 TBC1D13Q9NVG8 400 aa13.88□□□□□ -0.19
TOP3A-215ENST00000583328 MED19A0JLT2 244 aaPredicted RBP13.87□□□□□ -0.19
TOP3A-215ENST00000583328 ZBTB43O43298 467 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 ZNF862O60290 1169 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 OFD1O75665 1012 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 GBP2P32456 591 aaPredicted RBP13.87□□□□□ -0.19
TOP3A-215ENST00000583328 SLC11A1P49279 550 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 CLCN4P51793 760 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 CDC42EP1Q00587 391 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 PRKCEQ02156 737 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 FUT2Q10981 343 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 CRYGNQ8WXF5 182 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 RIN2Q8WYP3 895 aaPredicted RBP13.87□□□□□ -0.19
TOP3A-215ENST00000583328 LSG1Q9H089 658 aaKnown RBP13.87□□□□□ -0.19
TOP3A-215ENST00000583328 DISC1Q9NRI5 854 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 WNT16Q9UBV4 365 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 STK39Q9UEW8 545 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 R4GN57 208 aa13.87□□□□□ -0.19
TOP3A-215ENST00000583328 GOLGA8AA7E2F4 631 aa13.86□□□□□ -0.19
TOP3A-215ENST00000583328 GOLGA8BA8MQT2 603 aa13.86□□□□□ -0.19
TOP3A-215ENST00000583328 CNPP09543 421 aaKnown RBP13.86□□□□□ -0.19
TOP3A-215ENST00000583328 SFPQP23246 707 aaKnown RBP eCLIP13.86□□□□□ -0.19
TOP3A-215ENST00000583328 C15orf39Q6ZRI6 1047 aa13.86□□□□□ -0.19
TOP3A-215ENST00000583328 RSAD2Q8WXG1 361 aa13.86□□□□□ -0.19
TOP3A-215ENST00000583328 TRAIPQ9BWF2 469 aa13.86□□□□□ -0.19
TOP3A-215ENST00000583328 INO80BQ9C086 356 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms