RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 SH2D3AQ9BRG2 576 aa9.03□□□□□ -0.96
KPNB1-213ENST00000583013 POLR3CQ9BUI4 534 aaPredicted RBP9.03□□□□□ -0.96
KPNB1-213ENST00000583013 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.03□□□□□ -0.96
KPNB1-213ENST00000583013 ANKEF1Q9NU02 776 aa9.03□□□□□ -0.96
KPNB1-213ENST00000583013 GINS2Q9Y248 185 aa9.03□□□□□ -0.96
KPNB1-213ENST00000583013 PCDHB6Q9Y5E3 794 aa9.03□□□□□ -0.96
KPNB1-213ENST00000583013 TTC3P53804 2025 aa9.03□□□□□ -0.96
KPNB1-213ENST00000583013 UNC80Q8N2C7 3258 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 ZBTB39O15060 712 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 MGEA5O60502 916 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 MED24O75448 989 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 DARSP14868 501 aaKnown RBP9.02□□□□□ -0.97
KPNB1-213ENST00000583013 FOSL2P15408 326 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 RPA1P27694 616 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 RARRES1P49788 294 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 ERVK-21P61565 698 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 ATP2C1P98194 919 aaPredicted RBP9.02□□□□□ -0.97
KPNB1-213ENST00000583013 NFX1Q12986 1120 aaKnown RBP9.02□□□□□ -0.97
KPNB1-213ENST00000583013 PTGDRQ13258 359 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 PDIA5Q14554 519 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 DSC3Q14574 896 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 EMC2Q15006 297 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 HAUS3Q68CZ6 603 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 FAM117BQ6P1L5 589 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 BRAPQ7Z569 592 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 ZNF410Q86VK4 478 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 CATSPER3Q86XQ3 398 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 NPAS4Q8IUM7 802 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 IGSF22Q8N9C0 903 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 TCP11Q8WWU5 503 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 PPP1R16BQ96T49 567 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 YME1L1Q96TA2 773 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 GAS2L1Q99501 681 aaPredicted RBP9.02□□□□□ -0.97
KPNB1-213ENST00000583013 RAB34Q9BZG1 259 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 PRDM12Q9H4Q4 367 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 C1orf112Q9NSG2 853 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 SUCLA2Q9P2R7 463 aaPredicted RBP9.02□□□□□ -0.97
KPNB1-213ENST00000583013 ST3GAL5Q9UNP4 418 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 COL4A3BPQ9Y5P4 624 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 KIAA1671Q9BY89 1806 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 ADGRA3Q8IWK6 1321 aa9.02□□□□□ -0.97
KPNB1-213ENST00000583013 C9IYK1 514 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 ARHGAP33O14559 1287 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 DGAT1O75907 488 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 DGKIO75912 1065 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 UPP2O95045 317 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 STAG3L1P0CL83 205 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 POU3F3P20264 500 aaPredicted RBP9.01□□□□□ -0.97
KPNB1-213ENST00000583013 SARSP49591 514 aaKnown RBP9.01□□□□□ -0.97
KPNB1-213ENST00000583013 FNDC1Q4ZHG4 1894 aaPredicted RBP9.01□□□□□ -0.97
KPNB1-213ENST00000583013 XKR9Q5GH70 373 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 RHPN2Q8IUC4 686 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 NLRP7Q8WX94 980 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 PSPC1Q8WXF1 523 aaKnown RBP9.01□□□□□ -0.97
KPNB1-213ENST00000583013 DDX12PQ92771 950 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 ZDHHC16Q969W1 377 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 ZNF689Q96CS4 500 aaPredicted RBP9.01□□□□□ -0.97
KPNB1-213ENST00000583013 SCLT1Q96NL6 688 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 SAMD11Q96NU1 681 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 NACC1Q96RE7 527 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 TGS1Q96RS0 853 aaKnown RBP9.01□□□□□ -0.97
KPNB1-213ENST00000583013 MTRQ99707 1265 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 ADAM2Q99965 735 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 GCOM2Q9BZD3 368 aaPredicted RBP9.01□□□□□ -0.97
KPNB1-213ENST00000583013 INO80BQ9C086 356 aaPredicted RBP9.01□□□□□ -0.97
KPNB1-213ENST00000583013 ATP6V0A4Q9HBG4 840 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 XPNPEP1Q9NQW7 623 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 RGS18Q9NS28 235 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 LRWD1Q9UFC0 647 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 DBR1Q9UK59 544 aaKnown RBP9.01□□□□□ -0.97
KPNB1-213ENST00000583013 PCDHGA10Q9Y5H3 936 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 MYH15Q9Y2K3 1946 aa9.01□□□□□ -0.97
KPNB1-213ENST00000583013 XIRP2A4UGR9 3374 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 A0A087WZ62 844 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 DENND3A2RUS2 1198 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 VPS37CA5D8V6 355 aaPredicted RBP9□□□□□ -0.97
KPNB1-213ENST00000583013 EPOPA6NHQ4 379 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 ASAP2O43150 1006 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 LINC00271P0C7V0 271 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 SYT1P21579 422 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 SFPQP23246 707 aaKnown RBP eCLIP9□□□□□ -0.97
KPNB1-213ENST00000583013 FAM189BP81408 668 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 ADGRE1Q14246 886 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 MXD4Q14582 209 aaPredicted RBP9□□□□□ -0.97
KPNB1-213ENST00000583013 IL17AQ16552 155 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 ARL6IP4Q66PJ3 421 aaKnown RBP9□□□□□ -0.97
KPNB1-213ENST00000583013 DTHD1Q6ZMT9 781 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 SLC24A5Q71RS6 500 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 SPRED2Q7Z698 418 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 FERMT3Q86UX7 667 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 KSR1Q8IVT5 923 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 CMTR2Q8IYT2 770 aaKnown RBP9□□□□□ -0.97
KPNB1-213ENST00000583013 MAFAQ8NHW3 353 aaPredicted RBP9□□□□□ -0.97
KPNB1-213ENST00000583013 PIGOQ8TEQ8 1089 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 PRPF31Q8WWY3 499 aaKnown RBP9□□□□□ -0.97
KPNB1-213ENST00000583013 ARNTL2Q8WYA1 636 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 TMEM143Q96AN5 459 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 ZNF668Q96K58 619 aaPredicted RBP9□□□□□ -0.97
KPNB1-213ENST00000583013 NLRP4Q96MN2 994 aa9□□□□□ -0.97
KPNB1-213ENST00000583013 CCDC43Q96MW1 224 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms