RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 FAM200AQ8TCP9 573 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 PRPF31Q8WWY3 499 aaKnown RBP13.25□□□□□ -0.29
CCDC57-216ENST00000582885 SUGCTQ9HAC7 445 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 POLD4Q9HCU8 107 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 SUCLA2Q9P2R7 463 aaPredicted RBP13.25□□□□□ -0.29
CCDC57-216ENST00000582885 PCDHB13Q9Y5F0 798 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 GRIN2DO15399 1336 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 PHLPP2Q6ZVD8 1323 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 A0A1W2PQ45 241 aaPredicted RBP13.24□□□□□ -0.29
CCDC57-216ENST00000582885 A0A1W2PQY0 241 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 IKBKBO14920 756 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 SOX10P56693 466 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 GTF2BQ00403 316 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 LAMTOR4Q0VGL1 99 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 ITGA7Q13683 1181 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 TFDP1Q14186 410 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 CENPPQ6IPU0 288 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 HAUS6Q7Z4H7 955 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 NME8Q8N427 588 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 METTL13Q8N6R0 699 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 ANKLE1Q8NAG6 615 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 SLC43A3Q8NBI5 491 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 TMEM161BQ8NDZ6 487 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 ASAP3Q8TDY4 903 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 SCFD1Q8WVM8 642 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 BSNDQ8WZ55 320 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 NFKBIZQ9BYH8 718 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 KMT5AQ9NQR1 393 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 TBC1D7Q9P0N9 293 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 ARHGAP28Q9P2N2 729 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 RWDD2AQ9UIY3 292 aa13.24□□□□□ -0.29
CCDC57-216ENST00000582885 BICDL2A1A5D9 508 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 CCDC169A6NNP5 214 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 K7ENM7 598 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 GCNT3O95395 438 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 MYCNP04198 464 aaPredicted RBP13.23□□□□□ -0.29
CCDC57-216ENST00000582885 CYP2C9P11712 490 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 CCNE1P24864 410 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 NMT1P30419 496 aaKnown RBP13.23□□□□□ -0.29
CCDC57-216ENST00000582885 CLCN3P51790 818 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 CASP5P51878 434 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 EFNA5P52803 228 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 CHMP4BP1P59074 171 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 PAK1Q13153 545 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 DRP2Q13474 957 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 HIC1Q14526 733 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 IQCB1Q15051 598 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 CDCA2Q69YH5 1023 aaPredicted RBP13.23□□□□□ -0.29
CCDC57-216ENST00000582885 TAF2Q6P1X5 1199 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 RPAINQ86UA6 219 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 IFNLR1Q8IU57 520 aaPredicted RBP13.23□□□□□ -0.29
CCDC57-216ENST00000582885 KIAA0319LQ8IZA0 1049 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 LRRC71Q8N4P6 559 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 GLIS3Q8NEA6 775 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 ENOX1Q8TC92 643 aaKnown RBP13.23□□□□□ -0.29
CCDC57-216ENST00000582885 U2AF1L4Q8WU68 220 aaKnown RBP13.23□□□□□ -0.29
CCDC57-216ENST00000582885 P2RX5Q93086 422 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 MAP7D2Q96T17 732 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 FGFBP2Q9BYJ0 223 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 TMEM134Q9H6X4 195 aa13.23□□□□□ -0.29
CCDC57-216ENST00000582885 A0A0U1RQG5 324 aaPredicted RBP13.22□□□□□ -0.29
CCDC57-216ENST00000582885 SMTNL1A8MU46 457 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 SLC16A4O15374 487 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 TREHO43280 583 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 MYBP10242 640 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 HOXD13P35453 343 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 GJA8P48165 433 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 SNRPFP62306 86 aaKnown RBP13.22□□□□□ -0.29
CCDC57-216ENST00000582885 LRRC63Q05C16 580 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 CAPSQ13938 189 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 GSE1Q14687 1217 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 KNOP1Q1ED39 458 aaKnown RBP13.22□□□□□ -0.29
CCDC57-216ENST00000582885 L1TD1Q5T7N2 865 aaKnown RBP13.22□□□□□ -0.29
CCDC57-216ENST00000582885 GDF6Q6KF10 455 aaPredicted RBP13.22□□□□□ -0.29
CCDC57-216ENST00000582885 SERINC5Q86VE9 423 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 ZNF410Q86VK4 478 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 DEPTORQ8TB45 409 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 NELFBQ8WX92 580 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 VTI1AQ96AJ9 217 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 C2orf40Q9H1Z8 148 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 KCTD10Q9H3F6 313 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 TMEM206Q9H813 350 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 CBX8Q9HC52 389 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 STARD7Q9NQZ5 370 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 CGNQ9P2M7 1197 aaKnown RBP13.22□□□□□ -0.29
CCDC57-216ENST00000582885 MAPK8IP1Q9UQF2 711 aa13.22□□□□□ -0.29
CCDC57-216ENST00000582885 ADGRA3Q8IWK6 1321 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 FSD2A1L4K1 749 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 DENND3A2RUS2 1198 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 LRRIQ4A6NIV6 560 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 PDXKO00764 312 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 PRPF6O94906 941 aaKnown RBP13.21□□□□□ -0.29
CCDC57-216ENST00000582885 TFRCP02786 760 aaKnown RBP13.21□□□□□ -0.29
CCDC57-216ENST00000582885 CDK7P50613 346 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 PTENP60484 403 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 MYL5Q02045 173 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 NFIL3Q16649 462 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 EDRF1Q3B7T1 1238 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 ZCWPW2Q504Y3 356 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 ZC2HC1CQ53FD0 456 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms