RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 BTBD18B2RXH4 712 aa25■■□□□ 1.59
CASC3-207ENST00000581849 FGF18O76093 207 aa25■■□□□ 1.59
CASC3-207ENST00000581849 SKIP12755 728 aa25■■□□□ 1.59
CASC3-207ENST00000581849 IL9P15248 144 aa25■■□□□ 1.59
CASC3-207ENST00000581849 YWHABP31946 246 aaKnown RBP25■■□□□ 1.59
CASC3-207ENST00000581849 PLCB3Q01970 1234 aa25■■□□□ 1.59
CASC3-207ENST00000581849 ST3GAL1Q11201 340 aa25■■□□□ 1.59
CASC3-207ENST00000581849 NCAPH2Q6IBW4 605 aa25■■□□□ 1.59
CASC3-207ENST00000581849 RHPN2Q8IUC4 686 aa25■■□□□ 1.59
CASC3-207ENST00000581849 LLPHQ9BRT6 129 aaKnown RBP25■■□□□ 1.59
CASC3-207ENST00000581849 WRAP73Q9P2S5 460 aaPredicted RBP25■■□□□ 1.59
CASC3-207ENST00000581849 PRKAG3Q9UGI9 489 aa25■■□□□ 1.59
CASC3-207ENST00000581849 PCDHA12Q9UN75 941 aa25■■□□□ 1.59
CASC3-207ENST00000581849 LYPLA2O95372 231 aa24.99■■□□□ 1.59
CASC3-207ENST00000581849 PPM1AP35813 382 aa24.99■■□□□ 1.59
CASC3-207ENST00000581849 POLGP54098 1239 aaPredicted RBP24.99■■□□□ 1.59
CASC3-207ENST00000581849 NPEPPSP55786 919 aa24.99■■□□□ 1.59
CASC3-207ENST00000581849 ADAM15Q13444 863 aa24.99■■□□□ 1.59
CASC3-207ENST00000581849 CALCRLQ16602 461 aa24.99■■□□□ 1.59
CASC3-207ENST00000581849 EP400NLQ6ZTU2 488 aa24.99■■□□□ 1.59
CASC3-207ENST00000581849 THNSL1Q8IYQ7 743 aa24.99■■□□□ 1.59
CASC3-207ENST00000581849 EFHBQ8N7U6 833 aa24.99■■□□□ 1.59
CASC3-207ENST00000581849 TCP11Q8WWU5 503 aa24.99■■□□□ 1.59
CASC3-207ENST00000581849 MRPL9Q9BYD2 267 aaKnown RBP24.99■■□□□ 1.59
CASC3-207ENST00000581849 TLR9Q9NR96 1032 aa24.99■■□□□ 1.59
CASC3-207ENST00000581849 COL4A3BPQ9Y5P4 624 aa24.99■■□□□ 1.59
CASC3-207ENST00000581849 ARID2Q68CP9 1835 aa24.98■■□□□ 1.59
CASC3-207ENST00000581849 CARNS1A5YM72 827 aa24.98■■□□□ 1.59
CASC3-207ENST00000581849 NEMFO60524 1076 aa24.98■■□□□ 1.59
CASC3-207ENST00000581849 FGFR4P22455 802 aa24.98■■□□□ 1.59
CASC3-207ENST00000581849 IRS1P35568 1242 aa24.98■■□□□ 1.59
CASC3-207ENST00000581849 RAB27AP51159 221 aa24.98■■□□□ 1.59
CASC3-207ENST00000581849 SAFBQ15424 915 aaKnown RBP eCLIP24.98■■□□□ 1.59
CASC3-207ENST00000581849 GJD3Q8N144 294 aa24.98■■□□□ 1.59
CASC3-207ENST00000581849 PSPC1Q8WXF1 523 aaKnown RBP24.98■■□□□ 1.59
CASC3-207ENST00000581849 DYDC2Q96IM9 177 aa24.98■■□□□ 1.59
CASC3-207ENST00000581849 RGL1Q9NZL6 768 aa24.98■■□□□ 1.59
CASC3-207ENST00000581849 ASAP2O43150 1006 aa24.97■■□□□ 1.59
CASC3-207ENST00000581849 ATF7P17544 494 aaPredicted RBP24.97■■□□□ 1.59
CASC3-207ENST00000581849 CLLU1OSQ5K130 101 aa24.97■■□□□ 1.59
CASC3-207ENST00000581849 LRRC55Q6ZSA7 311 aa24.97■■□□□ 1.59
CASC3-207ENST00000581849 SRGAP1Q7Z6B7 1085 aa24.97■■□□□ 1.59
CASC3-207ENST00000581849 ZSCAN31Q96LW9 406 aaPredicted RBP24.97■■□□□ 1.59
CASC3-207ENST00000581849 NLRP4Q96MN2 994 aa24.97■■□□□ 1.59
CASC3-207ENST00000581849 ZNF558Q96NG5 402 aa24.97■■□□□ 1.59
CASC3-207ENST00000581849 CDCA3Q99618 268 aaPredicted RBP24.97■■□□□ 1.59
CASC3-207ENST00000581849 HSD17B14Q9BPX1 270 aa24.97■■□□□ 1.59
CASC3-207ENST00000581849 IFT122Q9HBG6 1241 aa24.97■■□□□ 1.59
CASC3-207ENST00000581849 PUF60Q9UHX1 559 aaKnown RBP24.97■■□□□ 1.59
CASC3-207ENST00000581849 ZNF623O75123 536 aa24.96■■□□□ 1.59
CASC3-207ENST00000581849 TBX10O75333 385 aa24.96■■□□□ 1.59
CASC3-207ENST00000581849 CSDE1O75534 798 aaKnown RBP24.96■■□□□ 1.59
CASC3-207ENST00000581849 SLITRK3O94933 977 aa24.96■■□□□ 1.59
CASC3-207ENST00000581849 PHKA2P46019 1235 aa24.96■■□□□ 1.59
CASC3-207ENST00000581849 SMAD4Q13485 552 aaKnown RBP24.96■■□□□ 1.59
CASC3-207ENST00000581849 EMC2Q15006 297 aa24.96■■□□□ 1.59
CASC3-207ENST00000581849 KCNT2Q6UVM3 1135 aa24.96■■□□□ 1.59
CASC3-207ENST00000581849 ADGRD2Q7Z7M1 963 aa24.96■■□□□ 1.59
CASC3-207ENST00000581849 ZNF579Q8NAF0 562 aaKnown RBP24.96■■□□□ 1.59
CASC3-207ENST00000581849 MRPS27Q92552 414 aaKnown RBP24.96■■□□□ 1.59
CASC3-207ENST00000581849 MTMR9Q96QG7 549 aa24.96■■□□□ 1.59
CASC3-207ENST00000581849 EIF2AK1Q9BQI3 630 aaKnown RBP24.96■■□□□ 1.59
CASC3-207ENST00000581849 TTC12Q9H892 705 aaPredicted RBP24.96■■□□□ 1.59
CASC3-207ENST00000581849 SH2B1Q9NRF2 756 aaPredicted RBP24.96■■□□□ 1.59
CASC3-207ENST00000581849 HCSTQ9UBK5 93 aa24.96■■□□□ 1.59
CASC3-207ENST00000581849 PIN4Q9Y237 131 aaKnown RBP24.96■■□□□ 1.59
CASC3-207ENST00000581849 FSCN2O14926 492 aa24.95■■□□□ 1.58
CASC3-207ENST00000581849 GTF2F1P35269 517 aaKnown RBP eCLIP24.95■■□□□ 1.58
CASC3-207ENST00000581849 HMGN5P82970 282 aaKnown RBP24.95■■□□□ 1.58
CASC3-207ENST00000581849 DLX2Q07687 328 aaPredicted RBP24.95■■□□□ 1.58
CASC3-207ENST00000581849 ORC2Q13416 577 aaPredicted RBP24.95■■□□□ 1.58
CASC3-207ENST00000581849 CTTNQ14247 550 aaKnown RBP24.95■■□□□ 1.58
CASC3-207ENST00000581849 PCBP1Q15365 356 aaKnown RBP eCLIP24.95■■□□□ 1.58
CASC3-207ENST00000581849 SMAD2Q15796 467 aaKnown RBP24.95■■□□□ 1.58
CASC3-207ENST00000581849 XKR9Q5GH70 373 aa24.95■■□□□ 1.58
CASC3-207ENST00000581849 TWF2Q6IBS0 349 aaKnown RBP24.95■■□□□ 1.58
CASC3-207ENST00000581849 CATSPER4Q7RTX7 472 aa24.95■■□□□ 1.58
CASC3-207ENST00000581849 KSR1Q8IVT5 923 aa24.95■■□□□ 1.58
CASC3-207ENST00000581849 RNF169Q8NCN4 708 aa24.95■■□□□ 1.58
CASC3-207ENST00000581849 PRPF31Q8WWY3 499 aaKnown RBP24.95■■□□□ 1.58
CASC3-207ENST00000581849 IGFLR1Q9H665 355 aa24.95■■□□□ 1.58
CASC3-207ENST00000581849 CD320Q9NPF0 282 aa24.95■■□□□ 1.58
CASC3-207ENST00000581849 ANKEF1Q9NU02 776 aa24.95■■□□□ 1.58
CASC3-207ENST00000581849 AGPAT5Q9NUQ2 364 aa24.95■■□□□ 1.58
CASC3-207ENST00000581849 CD207Q9UJ71 328 aa24.95■■□□□ 1.58
CASC3-207ENST00000581849 MBTPS2O43462 519 aa24.94■■□□□ 1.58
CASC3-207ENST00000581849 CSPG5O95196 566 aa24.94■■□□□ 1.58
CASC3-207ENST00000581849 CYP4A11Q02928 519 aa24.94■■□□□ 1.58
CASC3-207ENST00000581849 TPH2Q8IWU9 490 aa24.94■■□□□ 1.58
CASC3-207ENST00000581849 MICAL1Q8TDZ2 1067 aa24.94■■□□□ 1.58
CASC3-207ENST00000581849 MSLNLQ96KJ4 702 aa24.94■■□□□ 1.58
CASC3-207ENST00000581849 MTRQ99707 1265 aa24.94■■□□□ 1.58
CASC3-207ENST00000581849 TLE6Q9H808 572 aa24.94■■□□□ 1.58
CASC3-207ENST00000581849 FAM105AQ9NUU6 356 aa24.94■■□□□ 1.58
CASC3-207ENST00000581849 LINC01565O15544 149 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 EYA4O95677 639 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 NRIP1P48552 1158 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 NDUFV1P49821 464 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 KRT17Q04695 432 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 ZP2Q05996 745 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms