RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 FERMT3Q86UX7 667 aa13.82□□□□□ -0.2
SMARCD2-209ENST00000581832 MTRQ99707 1265 aa13.82□□□□□ -0.2
SMARCD2-209ENST00000581832 CHST12Q9NRB3 414 aa13.82□□□□□ -0.2
SMARCD2-209ENST00000581832 BMP2KQ9NSY1 1161 aaPredicted RBP13.82□□□□□ -0.2
SMARCD2-209ENST00000581832 TMEM161AQ9NX61 479 aa13.82□□□□□ -0.2
SMARCD2-209ENST00000581832 NOL7Q9UMY1 257 aaKnown RBP13.82□□□□□ -0.2
SMARCD2-209ENST00000581832 SMC3Q9UQE7 1217 aa13.82□□□□□ -0.2
SMARCD2-209ENST00000581832 PCDHB7Q9Y5E2 793 aa13.82□□□□□ -0.2
SMARCD2-209ENST00000581832 A0A0U1RQF3 1178 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 ASAP2O43150 1006 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 GTPBP6O43824 516 aaPredicted RBP13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 DGAT1O75907 488 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 RB1P06400 928 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 MUTP22033 750 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 HOXA11P31270 313 aaPredicted RBP13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 ARL2P36404 184 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 PRPHP41219 470 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 GPM6BQ13491 265 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 CAMK1Q14012 370 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 RILPL1Q5EBL4 403 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 LARP1BQ659C4 914 aaKnown RBP13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 MCTP1Q6DN14 999 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 LRRC55Q6ZSA7 311 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 ECHDC2Q86YB7 292 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 PSPC1Q8WXF1 523 aaKnown RBP13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 NLRP4Q96MN2 994 aa13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 INO80BQ9C086 356 aaPredicted RBP13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 DBR1Q9UK59 544 aaKnown RBP13.81□□□□□ -0.2
SMARCD2-209ENST00000581832 PLXNA4Q9HCM2 1894 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 LAD1O00515 517 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 FGFR1P11362 822 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 ZSCAN20P17040 1043 aaPredicted RBP13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 PTENP60484 403 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 ATP2C1P98194 919 aaPredicted RBP13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 POU5F1BQ06416 359 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 PAN2Q504Q3 1202 aaKnown RBP13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 POTEGQ6S5H5 508 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 SRGAP1Q7Z6B7 1085 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 ASAP3Q8TDY4 903 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 TCP11Q8WWU5 503 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 MRPL38Q96DV4 380 aaKnown RBP13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 SCLT1Q96NL6 688 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 CASD1Q96PB1 797 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 NACC1Q96RE7 527 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 MMTAG2Q9BU76 263 aaKnown RBP13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 PLVAPQ9BX97 442 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 CWH43Q9H720 699 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 ATP6V0A4Q9HBG4 840 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 HCSTQ9UBK5 93 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 LRFN2Q9ULH4 789 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 RWDD3Q9Y3V2 267 aa13.8□□□□□ -0.2
SMARCD2-209ENST00000581832 C5orf42Q9H799 3197 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 H3BQV1 296 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 GRM6O15303 877 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 EOMESO95936 686 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 SFPQP23246 707 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 GLRA2P23416 452 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 CTNNB1P35222 781 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 PHKA2P46019 1235 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 MXD4Q14582 209 aaPredicted RBP13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 CLLU1OSQ5K130 101 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 MICALL1Q8N3F8 863 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 RNF149Q8NC42 400 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 P2RX5Q93086 422 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 DACT1Q9NYF0 836 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 PLAGL2Q9UPG8 496 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 BDP1A6H8Y1 2624 aa13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 TCF20Q9UGU0 1960 aaKnown RBP13.79□□□□□ -0.2
SMARCD2-209ENST00000581832 TBKBP1A7MCY6 615 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 ZNF623O75123 536 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 ITGB1P05556 798 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 DNAJB1P25685 340 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 CDC25AP30304 524 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 CAPSQ13938 189 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 AMHR2Q16671 573 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 NAALADL2Q58DX5 795 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 UBXN11Q5T124 520 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 ERMNQ8TAM6 284 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 SPPL3Q8TCT6 385 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 ATXN2LQ8WWM7 1075 aaKnown RBP13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 NFKBIZQ9BYH8 718 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 TMEM117Q9H0C3 514 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 GPRC5CQ9NQ84 441 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 AGPAT5Q9NUQ2 364 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 TYW1Q9NV66 732 aaKnown RBP13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 RNF216Q9NWF9 866 aaPredicted RBP13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 LRWD1Q9UFC0 647 aa13.78□□□□□ -0.2
SMARCD2-209ENST00000581832 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 MEIS3P2A8K0S8 358 aa13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 PP2D1A8MPX8 630 aa13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 USO1O60763 962 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 CYP11B2P19099 503 aa13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 IBSPP21815 317 aaPredicted RBP13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 CCT6AP40227 531 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 MBTD1Q05BQ5 628 aa13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 COL19A1Q14993 1142 aa13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 HAUS3Q68CZ6 603 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms