RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, human

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFFL-208	ENST00000581039	EVPL	Q92817	2033 aa		11.23	□□□□□ -0.61
RFFL-208	ENST00000581039	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	OAT	P04181	439 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	CTSA	P10619	480 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	FGFR4	P22455	802 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	CDC42EP1	Q00587	391 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	FUT2	Q10981	343 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	TDG	Q13569	410 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	PRR16	Q569H4	304 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	LINC01465	Q8N7H1	131 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	SLC22A17	Q8WUG5	538 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	CRYGN	Q8WXF5	182 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	RSPH1	Q8WYR4	309 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	IGSF21	Q96ID5	467 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	ZBP1	Q9H171	429 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	C6orf50	Q9HD87	102 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	MYO15A	Q9UKN7	3530 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	FBXL21	Q9UKT6	434 aa		11.22	□□□□□ -0.61
RFFL-208	ENST00000581039	PLXNA3	P51805	1871 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	WDR64	B1ANS9	1081 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	STK25	O00506	426 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	PI15	O43692	258 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	SKI	P12755	728 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	AOC1	P19801	751 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	PHKA2	P46019	1235 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	RNASEL	Q05823	741 aa	Known RBP	11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	TBC1D8B	Q0IIM8	1120 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	RNF20	Q5VTR2	975 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	GLB1L	Q6UWU2	654 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	CCDC149	Q6ZUS6	474 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	GPR149	Q86SP6	731 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	CCDC105	Q8IYK2	499 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	KCNG4	Q8TDN1	519 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	RTP3	Q9BQQ7	232 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	EMILIN2	Q9BXX0	1053 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	SFXN1	Q9H9B4	322 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	ANO2	Q9NQ90	1003 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	DISC1	Q9NRI5	854 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	BRPF3	Q9ULD4	1205 aa		11.21	□□□□□ -0.61
RFFL-208	ENST00000581039	GOLGA8A	A7E2F4	631 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	GOLGA8B	A8MQT2	603 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	CSDE1	O75534	798 aa	Known RBP	11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	GALT	P07902	379 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	NPR3	P17342	541 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	SFPQ	P23246	707 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	KLRC2	P26717	231 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	GNA11	P29992	359 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	DNM2	P50570	870 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	PRKCE	Q02156	737 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	ANGPT1	Q15389	498 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	PFKFB3	Q16875	520 aa	Predicted RBP	11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	LONRF3	Q496Y0	759 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	NOMO2	Q5JPE7	1267 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	CWF19L1	Q69YN2	538 aa	Known RBP	11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	TWF2	Q6IBS0	349 aa	Known RBP	11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	DHX32	Q7L7V1	743 aa	Known RBP	11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	TMEM173	Q86WV6	379 aa	Predicted RBP	11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	SIX5	Q8N196	739 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	REXO1	Q8N1G1	1221 aa	Known RBP	11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	DTWD2	Q8NBA8	298 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	LPP	Q93052	612 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	ESYT1	Q9BSJ8	1104 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	TRAIP	Q9BWF2	469 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	INO80B	Q9C086	356 aa	Predicted RBP	11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	ZMYND12	Q9H0C1	365 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	NRDE2	Q9H7Z3	1164 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	KCNK12	Q9HB15	430 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	TBC1D13	Q9NVG8	400 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	STK39	Q9UEW8	545 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	INPP5F	Q9Y2H2	1132 aa		11.2	□□□□□ -0.62
RFFL-208	ENST00000581039	KLF18	A0A0U1RQI7	1052 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	CCDC196	A0A1B0GTZ2	297 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	ESYT2	A0FGR8	921 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	ZNF862	O60290	1169 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	CDC27	P30260	824 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	SFN	P31947	248 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	CIITA	P33076	1130 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	EXOSC10	Q01780	885 aa	Known RBP	11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	PTPN14	Q15678	1187 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	LETM2	Q2VYF4	491 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	PGBD4	Q96DM1	585 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	TCEANC2	Q96MN5	208 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	KLHL5	Q96PQ7	755 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	GBP3	Q9H0R5	595 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	SEMA4A	Q9H3S1	761 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	IGSF9	Q9P2J2	1179 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	DUSP12	Q9UNI6	340 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039	GVINP1	Q7Z2Y8	2422 aa		11.19	□□□□□ -0.62
RFFL-208	ENST00000581039		A0A087WZ62	844 aa		11.18	□□□□□ -0.62
RFFL-208	ENST00000581039	CHMP2A	O43633	222 aa		11.18	□□□□□ -0.62
RFFL-208	ENST00000581039	GAS7	O60861	476 aa		11.18	□□□□□ -0.62
RFFL-208	ENST00000581039	ZNF623	O75123	536 aa		11.18	□□□□□ -0.62
RFFL-208	ENST00000581039	OFD1	O75665	1012 aa		11.18	□□□□□ -0.62
RFFL-208	ENST00000581039	ALDH2	P05091	517 aa		11.18	□□□□□ -0.62
RFFL-208	ENST00000581039	SSB	P05455	408 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
RFFL-208	ENST00000581039	CNP	P09543	421 aa	Known RBP	11.18	□□□□□ -0.62

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