RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 NAPAP54920 295 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 TBC1D8BQ0IIM8 1120 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 LETM2Q2VYF4 491 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 WWC2Q6AWC2 1192 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 TMTC3Q6ZXV5 915 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 NIPA1Q7RTP0 329 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 ZNF598Q86UK7 904 aaKnown RBP10.33□□□□□ -0.76
PTPRM-210ENST00000578916 TMEM173Q86WV6 379 aaPredicted RBP10.33□□□□□ -0.76
PTPRM-210ENST00000578916 PLA2G4DQ86XP0 818 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 RAB11FIP4Q86YS3 637 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 TEX2Q8IWB9 1127 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 LRRC71Q8N4P6 559 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 FEZF2Q8TBJ5 459 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 RSPH1Q8WYR4 309 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 RUBCNQ92622 972 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 IGSF21Q96ID5 467 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 TMEM87BQ96K49 555 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 ZNF668Q96K58 619 aaPredicted RBP10.33□□□□□ -0.76
PTPRM-210ENST00000578916 RIC8AQ9NPQ8 531 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 MAFBQ9Y5Q3 323 aaPredicted RBP10.33□□□□□ -0.76
PTPRM-210ENST00000578916 SLC12A7Q9Y666 1083 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 MYO10Q9HD67 2058 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 WDR87Q6ZQQ6 2873 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 DMXL1Q9Y485 3027 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 KRBA1A5PL33 1030 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 IPO5O00410 1097 aaKnown RBP10.32□□□□□ -0.76
PTPRM-210ENST00000578916 SH2B2O14492 632 aaPredicted RBP10.32□□□□□ -0.76
PTPRM-210ENST00000578916 DHX15O43143 795 aaKnown RBP10.32□□□□□ -0.76
PTPRM-210ENST00000578916 PSAPP07602 524 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 GALTP07902 379 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 DARSP14868 501 aaKnown RBP10.32□□□□□ -0.76
PTPRM-210ENST00000578916 FGFR4P22455 802 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 GBP2P32456 591 aaPredicted RBP10.32□□□□□ -0.76
PTPRM-210ENST00000578916 MCM5P33992 734 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 SREBF1P36956 1147 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 RNASELQ05823 741 aaKnown RBP10.32□□□□□ -0.76
PTPRM-210ENST00000578916 AP3B2Q13367 1082 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 PTPN14Q15678 1187 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 SPECC1Q5M775 1068 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 PPP1R18Q6NYC8 613 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 C15orf39Q6ZRI6 1047 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 FANCBQ8NB91 859 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 NLRP7Q8WX94 980 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 FAM167AQ96KS9 214 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 KLHL5Q96PQ7 755 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 ZNF577Q9BSK1 485 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 TBC1D17Q9HA65 648 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 DLL3Q9NYJ7 618 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 GABBR1Q9UBS5 961 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 CA14Q9ULX7 337 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 PCDHA10Q9Y5I2 948 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 ZNF292O60281 2723 aa10.32□□□□□ -0.76
PTPRM-210ENST00000578916 SMCO2A6NFE2 343 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 FAM86B1E9PN63 330 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 KRT37O76014 449 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 IGHDP01880 384 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 SSBP05455 408 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTPRM-210ENST00000578916 DCNP07585 359 aaKnown RBP10.31□□□□□ -0.76
PTPRM-210ENST00000578916 FAM86B2P0C5J1 330 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 SP9P0CG40 484 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 SKIP12755 728 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 LIFRP42702 1097 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 PHKA2P46019 1235 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 GPC3P51654 580 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 CLCN4P51793 760 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 AAMPQ13685 434 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 RSPO4Q2I0M5 234 aaPredicted RBP10.31□□□□□ -0.76
PTPRM-210ENST00000578916 LONRF3Q496Y0 759 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 NOMO2Q5JPE7 1267 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 ZNF746Q6NUN9 644 aaPredicted RBP10.31□□□□□ -0.76
PTPRM-210ENST00000578916 GLB1LQ6UWU2 654 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 SYNE3Q6ZMZ3 975 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 SMAP1Q8IYB5 467 aaPredicted RBP10.31□□□□□ -0.76
PTPRM-210ENST00000578916 DCLK2Q8N568 766 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 BCL7CQ8WUZ0 217 aaPredicted RBP10.31□□□□□ -0.76
PTPRM-210ENST00000578916 RSAD2Q8WXG1 361 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 STAMQ92783 540 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 LPPQ93052 612 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 CNTNAP3BQ96NU0 1288 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 CNTNAP3Q9BZ76 1288 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 GCOM2Q9BZD3 368 aaPredicted RBP10.31□□□□□ -0.76
PTPRM-210ENST00000578916 GBP3Q9H0R5 595 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 GLT8D2Q9H1C3 349 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 NRDE2Q9H7Z3 1164 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 CHST12Q9NRB3 414 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 NRBP2Q9NSY0 501 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 TBC1D22BQ9NU19 505 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 TBC1D13Q9NVG8 400 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 STK39Q9UEW8 545 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 INPP5FQ9Y2H2 1132 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 SAMM50Q9Y512 469 aa10.31□□□□□ -0.76
PTPRM-210ENST00000578916 CSDE1O75534 798 aaKnown RBP10.3□□□□□ -0.76
PTPRM-210ENST00000578916 CNPP09543 421 aaKnown RBP10.3□□□□□ -0.76
PTPRM-210ENST00000578916 SRFP11831 508 aa10.3□□□□□ -0.76
PTPRM-210ENST00000578916 CHMLP26374 656 aa10.3□□□□□ -0.76
PTPRM-210ENST00000578916 SLC11A1P49279 550 aa10.3□□□□□ -0.76
PTPRM-210ENST00000578916 TTC22Q5TAA0 569 aa10.3□□□□□ -0.76
PTPRM-210ENST00000578916 TWF2Q6IBS0 349 aaKnown RBP10.3□□□□□ -0.76
PTPRM-210ENST00000578916 PHLDB3Q6NSJ2 640 aa10.3□□□□□ -0.76
PTPRM-210ENST00000578916 TYW1BQ6NUM6 668 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms