RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 SNX21Q969T3 373 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 ZNF689Q96CS4 500 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 SCLT1Q96NL6 688 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 SAMD11Q96NU1 681 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 ADAM2Q99965 735 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 INO80BQ9C086 356 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 LOXHD1Q8IVV2 1947 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 C9IYK1 514 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 K7ELQ4 463 aaPredicted RBP15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 DGAT1O75907 488 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 RARRES1P49788 294 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 EMC2Q15006 297 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 HAUS3Q68CZ6 603 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 RHPN2Q8IUC4 686 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 GJD3Q8N144 294 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 IGSF22Q8N9C0 903 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 NACC1Q96RE7 527 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 MTRQ99707 1265 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 RAB34Q9BZG1 259 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 ELAC1Q9H777 363 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 DBR1Q9UK59 544 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 COL4A3BPQ9Y5P4 624 aa15.21■□□□□ 0.03
CSNK1D-208ENST00000578501 ADGRA3Q8IWK6 1321 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 XIRP2A4UGR9 3374 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 A0A087WZ62 844 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 MED24O75448 989 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 ZSCAN20P17040 1043 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 MXD4Q14582 209 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 BRAPQ7Z569 592 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 SPRED2Q7Z698 418 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 FAM178BQ8IXR5 827 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 CMTR2Q8IYT2 770 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 PIGOQ8TEQ8 1089 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 PRPF31Q8WWY3 499 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 CLP1Q92989 425 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 TMEM143Q96AN5 459 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 FDXACB1Q9BRP7 624 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 IFT122Q9HBG6 1241 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 CD320Q9NPF0 282 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 CHST12Q9NRB3 414 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 LRWD1Q9UFC0 647 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 PCDHB7Q9Y5E2 793 aa15.2■□□□□ 0.02
CSNK1D-208ENST00000578501 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 LPXNO60711 386 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 SFPQP23246 707 aaKnown RBP eCLIP15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 SSTR3P32745 418 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 ATP2C1P98194 919 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 POU5F1BQ06416 359 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 LAMTOR4Q0VGL1 99 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 PUS10Q3MIT2 529 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 LEXMQ3ZCV2 418 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 EPC2Q52LR7 807 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 DTHD1Q6ZMT9 781 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 FERMT3Q86UX7 667 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 KSR1Q8IVT5 923 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 FIBCD1Q8N539 461 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 ZNF668Q96K58 619 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 NLRP4Q96MN2 994 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 CCDC43Q96MW1 224 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 C17orf80Q9BSJ5 609 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 TRAIPQ9BWF2 469 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 UBE2ZQ9H832 354 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 ATP6V0A4Q9HBG4 840 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 XPNPEP1Q9NQW7 623 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 TMEM161AQ9NX61 479 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 DACT1Q9NYF0 836 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 LRFN2Q9ULH4 789 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 RWDD3Q9Y3V2 267 aa15.19■□□□□ 0.02
CSNK1D-208ENST00000578501 LINC00271P0C7V0 271 aa15.18■□□□□ 0.02
CSNK1D-208ENST00000578501 ARL2P36404 184 aa15.18■□□□□ 0.02
CSNK1D-208ENST00000578501 BTG3Q14201 252 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-208ENST00000578501 PCBP1Q15365 356 aaKnown RBP eCLIP15.18■□□□□ 0.023e-6■■□□□ 12.1
CSNK1D-208ENST00000578501 IL17AQ16552 155 aa15.18■□□□□ 0.02
CSNK1D-208ENST00000578501 ARL6IP4Q66PJ3 421 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-208ENST00000578501 SRGAP1Q7Z6B7 1085 aa15.18■□□□□ 0.02
CSNK1D-208ENST00000578501 TMEM192Q8IY95 271 aa15.18■□□□□ 0.02
CSNK1D-208ENST00000578501 FBXO22Q8NEZ5 403 aa15.18■□□□□ 0.02
CSNK1D-208ENST00000578501 SNX27Q96L92 541 aa15.18■□□□□ 0.02
CSNK1D-208ENST00000578501 A0A0U1RQF3 1178 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 C5orf67F2Z3F1 127 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 CSDE1O75534 798 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 BMP15O95972 392 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 RB1P06400 928 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 SRGAP2CP0DJJ0 459 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 SYT1P21579 422 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 CCT6AP40227 531 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 NHLH1Q02575 133 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 POTEGQ6S5H5 508 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 IFNLR1Q8IU57 520 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 RNF149Q8NC42 400 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 MCPH1Q8NEM0 835 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 PLVAPQ9BX97 442 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 NFKBIZQ9BYH8 718 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 MTUS1Q9ULD2 1270 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 ARID2Q68CP9 1835 aa15.17■□□□□ 0.02
CSNK1D-208ENST00000578501 TRANK1O15050 2925 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 VPS37CA5D8V6 355 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 H3BNC9 293 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 HOXA2O43364 376 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 EOMESO95936 686 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms