RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 AS3MTQ9HBK9 375 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 KCND2Q9NZV8 630 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 COL20A1Q9P218 1284 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 NAGPAQ9UK23 515 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 PLAAQ9Y263 795 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 PARP14Q460N5 1801 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 ZNF541Q9H0D2 1346 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 TMCO5BA8MYB1 307 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 PDXKO00764 312 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 ZBED4O75132 1171 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 FLOT1O75955 427 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 FAM13AO94988 1023 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 CPP00450 1065 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 XRCC5P13010 732 aaKnown RBP12.42□□□□□ -0.42
GGA3-205ENST00000578348 ALAS1P13196 640 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 PON1P27169 355 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 LSP1P33241 339 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 ERVK-9P63128 1117 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 CEP85LQ5SZL2 805 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 PCNX4Q63HM2 1172 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 ALKBH5Q6P6C2 394 aaKnown RBP12.42□□□□□ -0.42
GGA3-205ENST00000578348 C1orf186Q6ZWK4 172 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 RBM46Q8TBY0 533 aaKnown RBP12.42□□□□□ -0.42
GGA3-205ENST00000578348 ATP6V1G3Q96LB4 118 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 CENPHQ9H3R5 247 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 RPAP3Q9H6T3 665 aaPredicted RBP12.42□□□□□ -0.42
GGA3-205ENST00000578348 RAVER2Q9HCJ3 691 aaKnown RBP12.42□□□□□ -0.42
GGA3-205ENST00000578348 TMEM59LQ9UK28 342 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 CTDP1Q9Y5B0 961 aaPredicted RBP12.42□□□□□ -0.42
GGA3-205ENST00000578348 BTNL10A8MVZ5 291 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 RSPH10B2B2RC85 870 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 EIF3DO15371 548 aaKnown RBP eCLIP12.42□□□□□ -0.42
GGA3-205ENST00000578348 RSPH10BP0C881 870 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 MYBP10242 640 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 ITGB5P18084 799 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 R3HDM1Q15032 1099 aaKnown RBP12.42□□□□□ -0.42
GGA3-205ENST00000578348 C10orf76Q5T2E6 689 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 PAXIP1Q6ZW49 1069 aaPredicted RBP12.42□□□□□ -0.42
GGA3-205ENST00000578348 FRMD5Q7Z6J6 570 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 DDX42Q86XP3 938 aaKnown RBP eCLIP12.42□□□□□ -0.42
GGA3-205ENST00000578348 CD302Q8IX05 232 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 CPXCR1Q8N123 301 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 SYTL5Q8TDW5 730 aaPredicted RBP12.42□□□□□ -0.42
GGA3-205ENST00000578348 PIGOQ8TEQ8 1089 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 ISCUQ9H1K1 167 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 TYW1Q9NV66 732 aaKnown RBP12.42□□□□□ -0.42
GGA3-205ENST00000578348 SEL1LQ9UBV2 794 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 UBIAD1Q9Y5Z9 338 aa12.42□□□□□ -0.42
GGA3-205ENST00000578348 UBE4BO95155 1302 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 AKAP3O75969 853 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 HPDP32754 393 aaPredicted RBP12.41□□□□□ -0.42
GGA3-205ENST00000578348 HOXD13P35453 343 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 HSPA9P38646 679 aaKnown RBP12.41□□□□□ -0.42
GGA3-205ENST00000578348 PPARDQ03181 441 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 IFI16Q16666 785 aaKnown RBP12.41□□□□□ -0.42
GGA3-205ENST00000578348 DPY19L2P1Q6NXN4 242 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 SLC30A10Q6XR72 485 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 LRRC57Q8N9N7 239 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 PLCB1Q9NQ66 1216 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 PICK1Q9NRD5 415 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 BZW2Q9Y6E2 419 aaKnown RBP12.41□□□□□ -0.42
GGA3-205ENST00000578348 GOLGA6L10A6NI86 522 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 CES2O00748 559 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 SLC16A3O15427 465 aaKnown RBP12.41□□□□□ -0.42
GGA3-205ENST00000578348 CLSTN1O94985 981 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 GCNT3O95395 438 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 RPL13P26373 211 aaKnown RBP12.41□□□□□ -0.42
GGA3-205ENST00000578348 ECHS1P30084 290 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 DGKZQ13574 1117 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 TKFCQ3LXA3 575 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 GJB7Q6PEY0 223 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 OR2W6PQ8NHA6 318 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 IL31RAQ8NI17 732 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 KAT2BQ92831 832 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 PBKQ96KB5 322 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 DDX47Q9H0S4 455 aaKnown RBP12.41□□□□□ -0.42
GGA3-205ENST00000578348 AJAP1Q9UKB5 411 aaPredicted RBP12.41□□□□□ -0.42
GGA3-205ENST00000578348 ODF2LQ9ULJ1 636 aa12.41□□□□□ -0.42
GGA3-205ENST00000578348 NOC2LQ9Y3T9 749 aaKnown RBP12.41□□□□□ -0.42
GGA3-205ENST00000578348 ASTN1O14525 1302 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 HMGB1P1B2RPK0 211 aaPredicted RBP12.4□□□□□ -0.42
GGA3-205ENST00000578348 PGRMC1O00264 195 aaKnown RBP12.4□□□□□ -0.42
GGA3-205ENST00000578348 SART1O43290 800 aaKnown RBP12.4□□□□□ -0.42
GGA3-205ENST00000578348 PPP1R37O75864 691 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 HSD17B3P37058 310 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 CASP4P49662 377 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 ZNF131P52739 623 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 BACE1P56817 501 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 SPP2Q13103 211 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 B4GALNT4Q76KP1 1039 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 MIER3Q7Z3K6 550 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 PEX26Q7Z412 305 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 METTL13Q8N6R0 699 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 ZNF280CQ8ND82 737 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 TPCN2Q8NHX9 752 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 ACTRT1Q8TDG2 376 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 SCFD2Q8WU76 684 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 C12orf42Q96LP6 360 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 LXNQ9BS40 222 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 EPN3Q9H201 632 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms