RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 TBCAO75347 108 aaKnown RBP12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 GAP43P17677 238 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 RTP1P59025 263 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 ARSHQ5FYA8 562 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 MARCH8Q5T0T0 291 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 C1orf53Q5VUE5 145 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 IER5Q5VY09 327 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 TAF2Q6P1X5 1199 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 NUDT18Q6ZVK8 323 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 NECAB2Q7Z6G3 386 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 CCDC65Q8IXS2 484 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 SH2D3AQ9BRG2 576 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 RUSC1Q9BVN2 902 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 SENP6Q9GZR1 1112 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 C17orf75Q9HAS0 396 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 SEL1LQ9UBV2 794 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 PCDHA2Q9Y5H9 948 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 COL4A3BPQ9Y5P4 624 aa12.4□□□□□ -0.42
TRAPPC8-204ENST00000578252 EVPLQ92817 2033 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 PVALEFA0A1B0GWK0 134 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 TLR3O15455 904 aaKnown RBP12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 ASAP2O43150 1006 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 FAM13AO94988 1023 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 LETM1O95202 739 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 CYP2C9P11712 490 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 CDK7P50613 346 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 ASIC1P78348 528 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 CDC42EP1Q00587 391 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 MDM2Q00987 491 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 DPYDQ12882 1025 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 GIT2Q14161 759 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 MXD4Q14582 209 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 PPP2R5AQ15172 486 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 FAM102BQ5T8I3 360 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 COL13A1Q5TAT6 717 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 GDF6Q6KF10 455 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 EFCAB12Q6NXP0 572 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 SLC39A5Q6ZMH5 540 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 UNC13DQ70J99 1090 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 RSPH3Q86UC2 560 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 GRAMD1CQ8IYS0 662 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 TTC13Q8NBP0 860 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 TRAPPC12Q8WVT3 735 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 PSPC1Q8WXF1 523 aaKnown RBP12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 STAMQ92783 540 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 DNAJC19Q96DA6 116 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 GSDMAQ96QA5 445 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 MAP7D2Q96T17 732 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 REEP2Q9BRK0 252 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 XPNPEP1Q9NQW7 623 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 RMND1Q9NWS8 449 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 LARSQ9P2J5 1176 aaKnown RBP12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 NOD1Q9Y239 953 aa12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 TRIP12Q14669 1992 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC8-204ENST00000578252 FRMD3A2A2Y4 597 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 TREHO43280 583 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 HIP1RO75146 1068 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 CAND2O75155 1236 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 IDEP14735 1019 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 SCP2P22307 547 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 ABCD1P33897 745 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 ZNF131P52739 623 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 PTK7Q13308 1070 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 CUL4BQ13620 913 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 SNX17Q15036 470 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 PTGISQ16647 500 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 CAVIN1Q6NZI2 390 aaKnown RBP12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 DYMQ7RTS9 669 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 RPAINQ86UA6 219 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 SERINC5Q86VE9 423 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 NME8Q8N427 588 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 CCDC155Q8N6L0 562 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 METTL13Q8N6R0 699 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 LINC01465Q8N7H1 131 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 SLC17A8Q8NDX2 589 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 SMARCE1Q969G3 411 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 ABHD8Q96I13 439 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 PAWRQ96IZ0 340 aaKnown RBP12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 IFT74Q96LB3 600 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 POLR3FQ9H1D9 316 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 SUGCTQ9HAC7 445 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 PARVGQ9HBI0 331 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 EXOC1Q9NV70 894 aa12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 TSR3Q9UJK0 312 aaKnown RBP12.38□□□□□ -0.43
TRAPPC8-204ENST00000578252 PHLPP2Q6ZVD8 1323 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 H0YCG3 227 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 RPN1P04843 607 aaKnown RBP12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 PLS3P13797 630 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 ARL2P36404 184 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 NAMPTP43490 491 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 CLCN3P51790 818 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 POU5F1BQ06416 359 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 RAD51AP2Q09MP3 1159 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 MAPK7Q13164 816 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 PSMD2Q13200 908 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 DMP1Q13316 513 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 PNOCQ13519 176 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 TFDP1Q14186 410 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 KCNB1Q14721 858 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms