RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 DLX3O60479 287 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 H2AFYO75367 372 aaKnown RBP4.03□□□□□ -1.76
TOP2A-202ENST00000577541 SOD2P04179 222 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 HKR1P10072 659 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 RBM25P49756 843 aaKnown RBP4.03□□□□□ -1.76
TOP2A-202ENST00000577541 SESN2P58004 480 aaPredicted RBP4.03□□□□□ -1.76
TOP2A-202ENST00000577541 BPIFB4P59827 614 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 PPP2R2AP63151 447 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 FAM189BP81408 668 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 ZNF425Q6IV72 752 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 ANKS3Q6ZW76 656 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 ARHGEF19Q8IW93 802 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 CAGE1Q8TC20 777 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 ZNF384Q8TF68 577 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 HNRNPLLQ8WVV9 542 aaKnown RBP4.03□□□□□ -1.76
TOP2A-202ENST00000577541 GCDHQ92947 438 aaPredicted RBP4.03□□□□□ -1.76
TOP2A-202ENST00000577541 ARMC5Q96C12 935 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 IL23AQ9NPF7 189 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 UCKL1Q9NWZ5 548 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 TLK1Q9UKI8 766 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 SRPK3Q9UPE1 567 aa4.03□□□□□ -1.76
TOP2A-202ENST00000577541 AGRPO00253 132 aa4.02□□□□□ -1.77
TOP2A-202ENST00000577541 MATN4O95460 622 aa4.02□□□□□ -1.77
TOP2A-202ENST00000577541 FGFR1P11362 822 aa4.02□□□□□ -1.77
TOP2A-202ENST00000577541 HERVK_113P62684 666 aa4.02□□□□□ -1.77
TOP2A-202ENST00000577541 DCAF17Q5H9S7 520 aaPredicted RBP4.02□□□□□ -1.77
TOP2A-202ENST00000577541 ZNF512Q96ME7 567 aaPredicted RBP4.02□□□□□ -1.77
TOP2A-202ENST00000577541 SLC46A2Q9BY10 475 aa4.02□□□□□ -1.77
TOP2A-202ENST00000577541 IPPKQ9H8X2 491 aa4.02□□□□□ -1.77
TOP2A-202ENST00000577541 RBM8AQ9Y5S9 174 aaKnown RBP4.02□□□□□ -1.77
TOP2A-202ENST00000577541 ATP23Q9Y6H3 246 aa4.02□□□□□ -1.77
TOP2A-202ENST00000577541 AHRRA9YTQ3 701 aa4.01□□□□□ -1.77
TOP2A-202ENST00000577541 TRIM38O00635 465 aa4.01□□□□□ -1.77
TOP2A-202ENST00000577541 C4BPAP04003 597 aaKnown RBP4.01□□□□□ -1.77
TOP2A-202ENST00000577541 SRSF4Q08170 494 aaKnown RBP4.01□□□□□ -1.77
TOP2A-202ENST00000577541 ST8SIA2Q92186 375 aa4.01□□□□□ -1.77
TOP2A-202ENST00000577541 GFM2Q969S9 779 aaKnown RBP4.01□□□□□ -1.77
TOP2A-202ENST00000577541 ZBTB9Q96C00 473 aa4.01□□□□□ -1.77
TOP2A-202ENST00000577541 RCAN3Q9UKA8 241 aa4.01□□□□□ -1.77
TOP2A-202ENST00000577541 IQCA1LA6NCM1 817 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 PRAMEF25A6NGN4 478 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 CGB1A6NKQ9 187 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 AMY2AP04746 511 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 AMY2BP19961 511 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 TCIRG1Q13488 830 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 HSP90AA2PQ14568 343 aaPredicted RBP4□□□□□ -1.77
TOP2A-202ENST00000577541 NTRK3Q16288 839 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 GAGE13Q4V321 117 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 NAALADL2Q58DX5 795 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 ARHGAP36Q6ZRI8 547 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 DCAF4Q8WV16 495 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 ARL8AQ96BM9 186 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 ZFYVE21Q9BQ24 234 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 KCNH6Q9H252 994 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 ARHGEF4Q9NR80 690 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 PODXL2Q9NZ53 605 aa4□□□□□ -1.77
TOP2A-202ENST00000577541 ZNF70Q9UC06 446 aaPredicted RBP4□□□□□ -1.77
TOP2A-202ENST00000577541 GNAT2P19087 354 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 HK1P19367 917 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 GPR85P60893 370 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 MAP3K12Q12852 859 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 RASGRF1Q13972 1273 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 SEC23AQ15436 765 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 GPR19Q15760 415 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 EP400NLQ6ZTU2 488 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 IFNL3Q8IZI9 196 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 LRRC47Q8N1G4 583 aaKnown RBP3.99□□□□□ -1.77
TOP2A-202ENST00000577541 SLC9A6Q92581 669 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 AARSD1Q9BTE6 412 aaKnown RBP3.99□□□□□ -1.77
TOP2A-202ENST00000577541 IER2Q9BTL4 223 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 DUSP26Q9BV47 211 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 CCDC113Q9H0I3 377 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 KMT5AQ9NQR1 393 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 EIF2B4Q9UI10 523 aaKnown RBP3.99□□□□□ -1.77
TOP2A-202ENST00000577541 MAGEL2Q9UJ55 1249 aa3.99□□□□□ -1.77
TOP2A-202ENST00000577541 R3HCC1Q9Y3T6 440 aaKnown RBP3.99□□□□□ -1.77
TOP2A-202ENST00000577541 WDR91A4D1P6 747 aa3.98□□□□□ -1.77
TOP2A-202ENST00000577541 MAFO75444 373 aaPredicted RBP3.98□□□□□ -1.77
TOP2A-202ENST00000577541 C1QL1O75973 258 aa3.98□□□□□ -1.77
TOP2A-202ENST00000577541 STC2O76061 302 aa3.98□□□□□ -1.77
TOP2A-202ENST00000577541 ESRRBO95718 433 aa3.98□□□□□ -1.77
TOP2A-202ENST00000577541 RBL2Q08999 1139 aa3.98□□□□□ -1.77
TOP2A-202ENST00000577541 SERINC3Q13530 473 aa3.98□□□□□ -1.77
TOP2A-202ENST00000577541 LONRF2Q1L5Z9 754 aa3.98□□□□□ -1.77
TOP2A-202ENST00000577541 STYK1Q6J9G0 422 aa3.98□□□□□ -1.77
TOP2A-202ENST00000577541 CKAP2LQ8IYA6 745 aa3.98□□□□□ -1.77
TOP2A-202ENST00000577541 SH2D3CQ8N5H7 860 aa3.98□□□□□ -1.77
TOP2A-202ENST00000577541 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.98□□□□□ -1.775e-36■■■■■ 27.1
TOP2A-202ENST00000577541 OSBP2Q969R2 916 aa3.98□□□□□ -1.77
TOP2A-202ENST00000577541 DKK2Q9UBU2 259 aa3.98□□□□□ -1.77
TOP2A-202ENST00000577541 PIPSLA2A3N6 862 aa3.97□□□□□ -1.77
TOP2A-202ENST00000577541 WNT9AO14904 365 aa3.97□□□□□ -1.77
TOP2A-202ENST00000577541 ADCY3O60266 1144 aa3.97□□□□□ -1.77
TOP2A-202ENST00000577541 STK10O94804 968 aaKnown RBP3.97□□□□□ -1.77
TOP2A-202ENST00000577541 CCKBRP32239 447 aa3.97□□□□□ -1.77
TOP2A-202ENST00000577541 FIGNQ5HY92 759 aa3.97□□□□□ -1.77
TOP2A-202ENST00000577541 IQSEC1Q6DN90 963 aa3.97□□□□□ -1.77
TOP2A-202ENST00000577541 MAMDC2Q7Z304 686 aaPredicted RBP3.97□□□□□ -1.77
TOP2A-202ENST00000577541 APBB1IPQ7Z5R6 666 aaPredicted RBP3.97□□□□□ -1.77
TOP2A-202ENST00000577541 JMYQ8N9B5 988 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms