RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 HAPLN2Q9GZV7 340 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 USP40Q9NVE5 1235 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 SPATA6Q9NWH7 488 aaPredicted RBP3.36□□□□□ -1.87
COPS3-213ENST00000577210 DNAJC28Q9NX36 388 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 ADAM29Q9UKF5 820 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 PLA2G2DQ9UNK4 145 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 NCANO14594 1321 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 PRSS38A1L453 326 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 GABRDO14764 452 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 DTNBO60941 627 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 KLHL18O94889 574 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 PCDH8O95206 1070 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 PLA2G1BP04054 148 aaKnown RBP3.35□□□□□ -1.87
COPS3-213ENST00000577210 CT47B1P0C2W7 299 aaPredicted RBP3.35□□□□□ -1.87
COPS3-213ENST00000577210 MYBL2P10244 700 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 BUD31P41223 144 aaPredicted RBP3.35□□□□□ -1.87
COPS3-213ENST00000577210 MLLT6P55198 1093 aaPredicted RBP3.35□□□□□ -1.87
COPS3-213ENST00000577210 WNT3AP56704 352 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 PPARAQ07869 468 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 CLUL1Q15846 466 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 PTPN21Q16825 1174 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 INAVAQ3KP66 663 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 PLEKHG6Q3KR16 790 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 GAGE13Q4V321 117 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 TMEM240Q5SV17 173 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 EFCAB2Q5VUJ9 269 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 MBNL2Q5VZF2 373 aaKnown RBP3.35□□□□□ -1.87
COPS3-213ENST00000577210 TRIM68Q6AZZ1 485 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 CCDC62Q6P9F0 684 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 LHFPL2Q6ZUX7 228 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 UNC5BQ8IZJ1 945 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 TXNDC5Q8NBS9 432 aaKnown RBP3.35□□□□□ -1.87
COPS3-213ENST00000577210 C1orf162Q8NEQ5 155 aaPredicted RBP3.35□□□□□ -1.87
COPS3-213ENST00000577210 COG1Q8WTW3 980 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 ZCCHC14Q8WYQ9 949 aaKnown RBP3.35□□□□□ -1.87
COPS3-213ENST00000577210 GCDHQ92947 438 aaPredicted RBP3.35□□□□□ -1.87
COPS3-213ENST00000577210 FUBP3Q96I24 572 aaKnown RBP eCLIP3.35□□□□□ -1.87
COPS3-213ENST00000577210 FAXDC2Q96IV6 333 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 UIMC1Q96RL1 719 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 FAM126AQ9BYI3 521 aaPredicted RBP3.35□□□□□ -1.87
COPS3-213ENST00000577210 CSRNP2Q9H175 543 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 OR10A2Q9H208 303 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 KCTD10Q9H3F6 313 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 C14orf93Q9H972 538 aaKnown RBP3.35□□□□□ -1.87
COPS3-213ENST00000577210 TCF7L1Q9HCS4 588 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 EPB41L4AQ9HCS5 686 aaPredicted RBP3.35□□□□□ -1.87
COPS3-213ENST00000577210 AASDHPPTQ9NRN7 309 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 RBPJLQ9UBG7 517 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 PRSS50Q9UI38 385 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 INVSQ9Y283 1065 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 GIT1Q9Y2X7 761 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 PPP2R3BQ9Y5P8 575 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 GPR45Q9Y5Y3 372 aa3.35□□□□□ -1.87
COPS3-213ENST00000577210 GOLGA6CA6NDK9 693 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 GOLGA6BA6NDN3 693 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 FAM171A2A8MVW0 826 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 B8ZZF3 427 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 ELL2O00472 640 aaPredicted RBP3.34□□□□□ -1.87
COPS3-213ENST00000577210 PRRG2O14669 202 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 FFAR3O14843 346 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 MTSS1O43312 755 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 GASTP01350 101 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 GOLGA6DP0CG33 693 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 COL6A1P12109 1028 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 HOXA5P20719 270 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 AGXTP21549 392 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 GPR3P46089 330 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 KCNQ1P51787 676 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 LGALS4P56470 323 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 EVA1CP58658 441 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 PDCD1Q15116 288 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 TTF1Q15361 905 aaPredicted RBP3.34□□□□□ -1.87
COPS3-213ENST00000577210 ZNF827Q17R98 1081 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 MUM1Q2TAK8 710 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 MUM1L1Q5H9M0 696 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 MCTP2Q6DN12 878 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 PPP4R3AQ6IN85 833 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 LRSAM1Q6UWE0 723 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 BTNL9Q6UXG8 535 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 USP30Q70CQ3 517 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 STK32CQ86UX6 486 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 ZNF761Q86XN6 746 aaPredicted RBP3.34□□□□□ -1.87
COPS3-213ENST00000577210 MIER2Q8N344 545 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 PPP1R14CQ8TAE6 165 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 ZNF526Q8TF50 670 aaPredicted RBP3.34□□□□□ -1.87
COPS3-213ENST00000577210 RELTQ969Z4 430 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 SLC7A6OSQ96CW6 309 aaPredicted RBP3.34□□□□□ -1.87
COPS3-213ENST00000577210 C20orf173Q96LM9 149 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 ACE2Q9BYF1 805 aaPredicted RBP3.34□□□□□ -1.87
COPS3-213ENST00000577210 KRTAP9-3Q9BYQ3 159 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 GREM2Q9H772 168 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 SEC61A2Q9H9S3 476 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 IFT122Q9HBG6 1241 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 ZNF277Q9NRM2 450 aaPredicted RBP3.34□□□□□ -1.87
COPS3-213ENST00000577210 CCM2LQ9NUG4 571 aaPredicted RBP3.34□□□□□ -1.87
COPS3-213ENST00000577210 GOLGA6AQ9NYA3 693 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 PNMA8BQ9ULN7 279 aaPredicted RBP3.34□□□□□ -1.87
COPS3-213ENST00000577210 USP18Q9UMW8 372 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 ANKRD6Q9Y2G4 727 aa3.34□□□□□ -1.87
COPS3-213ENST00000577210 ZDHHC9Q9Y397 364 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms