RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 CREB3L3Q68CJ9 461 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 SYNE3Q6ZMZ3 975 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 DDX53Q86TM3 631 aaKnown RBP11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 TMEM173Q86WV6 379 aaPredicted RBP11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 ADSSL1Q8N142 457 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 VPS52Q8N1B4 723 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 LRRC71Q8N4P6 559 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 AUTS2Q8WXX7 1259 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 TMEM169Q96HH4 297 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 MAP7D2Q96T17 732 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 TRAIPQ9BWF2 469 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 MRPL9Q9BYD2 267 aaKnown RBP11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 FAM217BQ9NTX9 383 aaPredicted RBP11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 DACT1Q9NYF0 836 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 GABBR1Q9UBS5 961 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 DBR1Q9UK59 544 aaKnown RBP11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 BRPF3Q9ULD4 1205 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 ADAMTS3O15072 1205 aa11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 AOC1P19801 751 aa11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 FGFR4P22455 802 aa11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 SETQ01105 290 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 EXOSC10Q01780 885 aaKnown RBP11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 TDGQ13569 410 aa11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 GPR149Q86SP6 731 aa11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 CCDC105Q8IYK2 499 aa11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 FLCNQ8NFG4 579 aa11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 RSPH1Q8WYR4 309 aa11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 IGSF21Q96ID5 467 aa11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 ZNF668Q96K58 619 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 FAM167AQ96KS9 214 aa11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 CHST12Q9NRB3 414 aa11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 NRBP2Q9NSY0 501 aa11.28□□□□□ -0.6
CALCOCO2-227ENST00000575560 CARNS1A5YM72 827 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 ZC3H11AO75152 810 aaKnown RBP eCLIP11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 CSDE1O75534 798 aaKnown RBP11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 OATP04181 439 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 GALTP07902 379 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 CIITAP33076 1130 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 CA8P35219 290 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 PHKA2P46019 1235 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 ANGPT1Q15389 498 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 TARBP2Q15633 366 aaKnown RBP11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 RTN1Q16799 776 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 TMC5Q6UXY8 1006 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 OTOP3Q7RTS5 596 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 CABP7Q86V35 215 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 PPFIBP1Q86W92 1011 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 BCL7CQ8WUZ0 217 aaPredicted RBP11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 LENG9Q96B70 501 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 ACSF2Q96CM8 615 aaPredicted RBP11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 RTP3Q9BQQ7 232 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 VN1R3Q9BXE9 311 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 ZMYND12Q9H0C1 365 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 NRDE2Q9H7Z3 1164 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 KCNK12Q9HB15 430 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 SAMM50Q9Y512 469 aa11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 EP300Q09472 2414 aaPredicted RBP11.27□□□□□ -0.61
CALCOCO2-227ENST00000575560 ESYT2A0FGR8 921 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 WDR64B1ANS9 1081 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 ZBTB43O43298 467 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 EDIL3O43854 480 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 LILRB3O75022 631 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 ZNF623O75123 536 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 CDC27P30260 824 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 CDC42EP1Q00587 391 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 DRP2Q13474 957 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 PTPN14Q15678 1187 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 PFKFB3Q16875 520 aaPredicted RBP11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 PRR16Q569H4 304 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 C15orf39Q6ZRI6 1047 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 DTWD2Q8NBA8 298 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 TMEM87AQ8NBN3 555 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 NLRP7Q8WX94 980 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 LPPQ93052 612 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 CEP89Q96ST8 783 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 ESYT1Q9BSJ8 1104 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 SFXN1Q9H9B4 322 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 DISC1Q9NRI5 854 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 TBC1D13Q9NVG8 400 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 DUSP12Q9UNI6 340 aa11.26□□□□□ -0.61
CALCOCO2-227ENST00000575560 MYH9P35579 1960 aaKnown RBP11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 IGKV6-21A0A0C4DH24 114 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 MEIS3P2A8K0S8 358 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 OFD1O75665 1012 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 SKIP12755 728 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 ADD1P35611 737 aaKnown RBP11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 CLCN4P51793 760 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 PRKCEQ02156 737 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 TBC1D8BQ0IIM8 1120 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 UGCGQ16739 394 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 LETM2Q2VYF4 491 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 NOMO2Q5JPE7 1267 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 CCDC149Q6ZUS6 474 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 DHX32Q7L7V1 743 aaKnown RBP11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 SIX5Q8N196 739 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 KLHL5Q96PQ7 755 aa11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 NIFKQ9BYG3 293 aaKnown RBP11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 GCOM2Q9BZD3 368 aaPredicted RBP11.25□□□□□ -0.61
CALCOCO2-227ENST00000575560 SEMA4AQ9H3S1 761 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms