RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 EPSTI1Q96J88 318 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 IFT74Q96LB3 600 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 ZDHHC9Q9Y397 364 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 RANBP2P49792 3224 aaKnown RBP16.86■□□□□ 0.29
LITAF-217ENST00000575426 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.86■□□□□ 0.29
LITAF-217ENST00000575426 CUTAO60888 179 aa16.86■□□□□ 0.29
LITAF-217ENST00000575426 UPP2O95045 317 aa16.86■□□□□ 0.29
LITAF-217ENST00000575426 PLA2G4BP0C869 781 aa16.86■□□□□ 0.29
LITAF-217ENST00000575426 ME1P48163 572 aa16.86■□□□□ 0.29
LITAF-217ENST00000575426 PPP2R5AQ15172 486 aa16.86■□□□□ 0.29
LITAF-217ENST00000575426 FAM109BQ6ICB4 259 aaPredicted RBP16.86■□□□□ 0.29
LITAF-217ENST00000575426 FAM117BQ6P1L5 589 aa16.86■□□□□ 0.29
LITAF-217ENST00000575426 CATSPER4Q7RTX7 472 aa16.86■□□□□ 0.29
LITAF-217ENST00000575426 KCNK18Q7Z418 384 aa16.86■□□□□ 0.29
LITAF-217ENST00000575426 SYT2Q8N9I0 419 aaPredicted RBP16.86■□□□□ 0.29
LITAF-217ENST00000575426 KIFAP3Q92845 792 aa16.86■□□□□ 0.29
LITAF-217ENST00000575426 TIPINQ9BVW5 301 aa16.86■□□□□ 0.29
LITAF-217ENST00000575426 PCDHA11Q9Y5I1 949 aa16.86■□□□□ 0.29
LITAF-217ENST00000575426 TLL1O43897 1013 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 CSDE1O75534 798 aaKnown RBP16.85■□□□□ 0.29
LITAF-217ENST00000575426 STAG3L1P0CL83 205 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 PLCG1P19174 1290 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 FGFR4P22455 802 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 GLRA2P23416 452 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 DNAJB2P25686 324 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 RABGGTBP53611 331 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 POU5F1BQ06416 359 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 NCBP1Q09161 790 aaKnown RBP16.85■□□□□ 0.29
LITAF-217ENST00000575426 DHX8Q14562 1220 aaKnown RBP16.85■□□□□ 0.29
LITAF-217ENST00000575426 RRAGBQ5VZM2 374 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 RINT1Q6NUQ1 792 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 GPR153Q6NV75 609 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 ASAP3Q8TDY4 903 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 TOP1MTQ969P6 601 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 ADAM2Q99965 735 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 PBX4Q9BYU1 374 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 TSPYL2Q9H2G4 693 aaPredicted RBP16.85■□□□□ 0.29
LITAF-217ENST00000575426 TMX1Q9H3N1 280 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 IFT122Q9HBG6 1241 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 GPRC5CQ9NQ84 441 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 C1orf112Q9NSG2 853 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 KCND2Q9NZV8 630 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 LRFN2Q9ULH4 789 aa16.85■□□□□ 0.29
LITAF-217ENST00000575426 LRRIQ4A6NIV6 560 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 ERLIN2O94905 339 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 IBSPP21815 317 aaPredicted RBP16.84■□□□□ 0.29
LITAF-217ENST00000575426 PTENP60484 403 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 CAPSQ13938 189 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 ZNF697Q5TEC3 545 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 CCDC73Q6ZRK6 1079 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 USP49Q70CQ1 688 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 ZBTB8OSQ8IWT0 167 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 TIFAQ96CG3 184 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 SPATA32Q96LK8 384 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 DRC1Q96MC2 740 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 RAD9AQ99638 391 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 C2orf40Q9H1Z8 148 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 SLC28A3Q9HAS3 691 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 CHST12Q9NRB3 414 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 RGS18Q9NS28 235 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 DACT1Q9NYF0 836 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 STK17AQ9UEE5 414 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 RCOR1Q9UKL0 485 aa16.84■□□□□ 0.29
LITAF-217ENST00000575426 RBAK-RBAKDNI3L0D1 243 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 INO80B-WBP1J3KQ70 363 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 HIP1RO75146 1068 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 GJB5O95377 273 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 DDIT3P35638 169 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 PBX2P40425 430 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 SLC12A3P55017 1021 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 MCM6Q14566 821 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 PCBP1Q15365 356 aaKnown RBP eCLIP16.83■□□□□ 0.28
LITAF-217ENST00000575426 C1orf186Q6ZWK4 172 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 SLC24A5Q71RS6 500 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 TMCO2Q7Z6W1 182 aaPredicted RBP16.83■□□□□ 0.28
LITAF-217ENST00000575426 RTN4RL1Q86UN2 441 aaPredicted RBP16.83■□□□□ 0.28
LITAF-217ENST00000575426 DEPTORQ8TB45 409 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 LARP4BQ92615 738 aaKnown RBP16.83■□□□□ 0.28
LITAF-217ENST00000575426 RAD54LQ92698 747 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 RUSC1Q9BVN2 902 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 PANK2Q9BZ23 570 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 SCAND2PQ9GZW5 306 aaPredicted RBP16.83■□□□□ 0.28
LITAF-217ENST00000575426 KCNG1Q9UIX4 513 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 INSL6Q9Y581 213 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 PCDHB7Q9Y5E2 793 aa16.83■□□□□ 0.28
LITAF-217ENST00000575426 MYO9BQ13459 2157 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 MGEA5O60502 916 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 KRT18P05783 430 aaKnown RBP16.82■□□□□ 0.28
LITAF-217ENST00000575426 GUCY2CP25092 1073 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 STAT6P42226 847 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 NAMPTP43490 491 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 SARSP49591 514 aaKnown RBP16.82■□□□□ 0.28
LITAF-217ENST00000575426 GPBP1Q86WP2 473 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 IFNLR1Q8IU57 520 aaPredicted RBP16.82■□□□□ 0.28
LITAF-217ENST00000575426 NPAS4Q8IUM7 802 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 LINC01599Q8WXQ3 324 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 YME1L1Q96TA2 773 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 NFKBIZQ9BYH8 718 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 NKX2-4Q9H2Z4 354 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 POLD4Q9HCU8 107 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms