RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 C5orf67F2Z3F1 127 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 M0QZ92 97 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 LAD1O00515 517 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 GAS2O43903 313 aaKnown RBP9.68□□□□□ -0.86
SMG6-216ENST00000575176 FOSL2P15408 326 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 MUTP22033 750 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 MBTD1Q05BQ5 628 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 LAMTOR4Q0VGL1 99 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 CAMK1Q14012 370 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 PDIA5Q14554 519 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 XKR9Q5GH70 373 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 CLLU1OSQ5K130 101 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 LARP1BQ659C4 914 aaKnown RBP9.68□□□□□ -0.86
SMG6-216ENST00000575176 BRAPQ7Z569 592 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 RHPN2Q8IUC4 686 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 TPH2Q8IWU9 490 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 ADAM2Q99965 735 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 NFKBIZQ9BYH8 718 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 CCDC113Q9H0I3 377 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 NOL7Q9UMY1 257 aaKnown RBP9.68□□□□□ -0.86
SMG6-216ENST00000575176 KIF3AQ9Y496 699 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 INSL6Q9Y581 213 aa9.68□□□□□ -0.86
SMG6-216ENST00000575176 MRPL42Q9Y6G3 142 aaKnown RBP9.68□□□□□ -0.86
SMG6-216ENST00000575176 TSPAN1O60635 241 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 USO1O60763 962 aaKnown RBP9.67□□□□□ -0.86
SMG6-216ENST00000575176 DKC1O60832 514 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMG6-216ENST00000575176 DGAT1O75907 488 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 UPP2O95045 317 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 XRCC6P12956 609 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMG6-216ENST00000575176 POLGP54098 1239 aaPredicted RBP9.67□□□□□ -0.86
SMG6-216ENST00000575176 PTENP60484 403 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 COL19A1Q14993 1142 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 EPC2Q52LR7 807 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 FAM102BQ5T8I3 360 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 ARL6IP4Q66PJ3 421 aaKnown RBP9.67□□□□□ -0.86
SMG6-216ENST00000575176 LRRC55Q6ZSA7 311 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 CMTR2Q8IYT2 770 aaKnown RBP9.67□□□□□ -0.86
SMG6-216ENST00000575176 ZNF710Q8N1W2 664 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 MAFAQ8NHW3 353 aaPredicted RBP9.67□□□□□ -0.86
SMG6-216ENST00000575176 PSPC1Q8WXF1 523 aaKnown RBP9.67□□□□□ -0.86
SMG6-216ENST00000575176 SLC7A3Q8WY07 619 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 ARNTL2Q8WYA1 636 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 NLRP4Q96MN2 994 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 TGS1Q96RS0 853 aaKnown RBP9.67□□□□□ -0.86
SMG6-216ENST00000575176 MTRQ99707 1265 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 RUSC1Q9BVN2 902 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 CWH43Q9H720 699 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 ATP6V0A4Q9HBG4 840 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 PRDM6Q9NQX0 595 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 FOXD4L1Q9NU39 408 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 BLOC1S4Q9NUP1 217 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 LRWD1Q9UFC0 647 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 FBXO2Q9UK22 296 aaPredicted RBP9.67□□□□□ -0.86
SMG6-216ENST00000575176 CLIC4Q9Y696 253 aa9.67□□□□□ -0.86
SMG6-216ENST00000575176 A0A0U1RQF3 1178 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 VPS37CA5D8V6 355 aaPredicted RBP9.66□□□□□ -0.86
SMG6-216ENST00000575176 E9PMD0 336 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 GPR182O15218 404 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 B4GALT5O43286 388 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 FGFR1P11362 822 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 DNAJB1P25685 340 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 TMOD1P28289 359 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 POU5F1BQ06416 359 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 NFX1Q12986 1120 aaKnown RBP9.66□□□□□ -0.86
SMG6-216ENST00000575176 SF3A1Q15459 793 aaKnown RBP9.66□□□□□ -0.86
SMG6-216ENST00000575176 HAUS3Q68CZ6 603 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 MCTP1Q6DN14 999 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 FAM43BQ6ZT52 329 aaPredicted RBP9.66□□□□□ -0.86
SMG6-216ENST00000575176 USP49Q70CQ1 688 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 SLC24A5Q71RS6 500 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 TAS1R3Q7RTX0 852 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 ECHDC2Q86YB7 292 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 SNX29Q8TEQ0 813 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 NLRP7Q8WX94 980 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 CASD1Q96PB1 797 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 USP28Q96RU2 1077 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 POLR3FQ9H1D9 316 aaPredicted RBP9.66□□□□□ -0.86
SMG6-216ENST00000575176 ELAC1Q9H777 363 aaKnown RBP9.66□□□□□ -0.86
SMG6-216ENST00000575176 C1orf112Q9NSG2 853 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 DDX19AQ9NUU7 478 aaKnown RBP9.66□□□□□ -0.86
SMG6-216ENST00000575176 TMEM161AQ9NX61 479 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 MTUS1Q9ULD2 1270 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 ZDHHC9Q9Y397 364 aa9.66□□□□□ -0.86
SMG6-216ENST00000575176 C2orf16Q68DN1 1984 aa9.65□□□□□ -0.86
SMG6-216ENST00000575176 A0A087X0B3 334 aa9.65□□□□□ -0.86
SMG6-216ENST00000575176 VWA3AA6NCI4 1184 aa9.65□□□□□ -0.86
SMG6-216ENST00000575176 H3BNC9 293 aa9.65□□□□□ -0.86
SMG6-216ENST00000575176 H3BQV1 296 aa9.65□□□□□ -0.86
SMG6-216ENST00000575176 INPPL1O15357 1258 aa9.65□□□□□ -0.86
SMG6-216ENST00000575176 STX6O43752 255 aa9.65□□□□□ -0.86
SMG6-216ENST00000575176 CYP11B2P19099 503 aa9.65□□□□□ -0.86
SMG6-216ENST00000575176 CCT6AP40227 531 aaKnown RBP9.65□□□□□ -0.86
SMG6-216ENST00000575176 PHKA2P46019 1235 aa9.65□□□□□ -0.86
SMG6-216ENST00000575176 NASPP49321 788 aaPredicted RBP9.65□□□□□ -0.86
SMG6-216ENST00000575176 AFF1P51825 1210 aaKnown RBP9.65□□□□□ -0.86
SMG6-216ENST00000575176 SLC12A3P55017 1021 aa9.65□□□□□ -0.86
SMG6-216ENST00000575176 GNL2Q13823 731 aaKnown RBP9.65□□□□□ -0.86
SMG6-216ENST00000575176 NAALADL2Q58DX5 795 aa9.65□□□□□ -0.86
SMG6-216ENST00000575176 PADI6Q6TGC4 694 aa9.65□□□□□ -0.86
SMG6-216ENST00000575176 PPP4R3CPQ6ZMV5 832 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms