RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 CYP2J2P51589 502 aa31.89■■■□□ 2.69
CTDNEP1-208ENST00000573600 HSDL1Q3SXM5 330 aa31.89■■■□□ 2.69
CTDNEP1-208ENST00000573600 MAP4K3Q8IVH8 894 aa31.89■■■□□ 2.69
CTDNEP1-208ENST00000573600 REXO1L1PQ8IX06 675 aa31.89■■■□□ 2.69
CTDNEP1-208ENST00000573600 CCDC155Q8N6L0 562 aa31.89■■■□□ 2.69
CTDNEP1-208ENST00000573600 BSNDQ8WZ55 320 aa31.89■■■□□ 2.69
CTDNEP1-208ENST00000573600 EMSYQ7Z589 1322 aa31.88■■■□□ 2.69
CTDNEP1-208ENST00000573600 RBM47A0AV96 593 aaKnown RBP31.88■■■□□ 2.69
CTDNEP1-208ENST00000573600 EXOC3O60645 756 aa31.88■■■□□ 2.69
CTDNEP1-208ENST00000573600 TARBP2Q15633 366 aaKnown RBP31.88■■■□□ 2.69
CTDNEP1-208ENST00000573600 BBXQ8WY36 941 aaPredicted RBP31.88■■■□□ 2.69
CTDNEP1-208ENST00000573600 SLC35C1Q96A29 364 aa31.88■■■□□ 2.69
CTDNEP1-208ENST00000573600 CEP89Q96ST8 783 aa31.88■■■□□ 2.69
CTDNEP1-208ENST00000573600 PDGFCQ9NRA1 345 aa31.88■■■□□ 2.69
CTDNEP1-208ENST00000573600 SLC15A5A6NIM6 579 aa31.87■■■□□ 2.69
CTDNEP1-208ENST00000573600 SLC26A2P50443 739 aa31.87■■■□□ 2.69
CTDNEP1-208ENST00000573600 MTF1Q14872 753 aa31.87■■■□□ 2.69
CTDNEP1-208ENST00000573600 PPP2R5AQ15172 486 aa31.87■■■□□ 2.69
CTDNEP1-208ENST00000573600 DCAF17Q5H9S7 520 aaPredicted RBP31.87■■■□□ 2.69
CTDNEP1-208ENST00000573600 TCERG1LQ5VWI1 586 aa31.87■■■□□ 2.69
CTDNEP1-208ENST00000573600 GLG1Q92896 1179 aa31.87■■■□□ 2.69
CTDNEP1-208ENST00000573600 SLC5A4Q9NY91 659 aa31.87■■■□□ 2.69
CTDNEP1-208ENST00000573600 R3HCC1Q9Y3T6 440 aaKnown RBP31.87■■■□□ 2.69
CTDNEP1-208ENST00000573600 DENND3A2RUS2 1198 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 SOX10P56693 466 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 INHBEP58166 350 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 CDK17Q00537 523 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 TAPT1Q6NXT6 567 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 EXOC8Q8IYI6 725 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 KCNN1Q92952 543 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 CDKN2AIPQ9NXV6 580 aaPredicted RBP31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 CEP72Q9P209 647 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 ADGRA2Q96PE1 1338 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 HNRNPH3P31942 346 aaKnown RBP31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 LAMC2Q13753 1193 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 WDR59Q6PJI9 974 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 LSM14BQ9BX40 385 aaKnown RBP31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 NUCKS1Q9H1E3 243 aaKnown RBP31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 ADGRG1Q9Y653 693 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 PASKQ96RG2 1323 aa31.86■■■□□ 2.69
CTDNEP1-208ENST00000573600 GTPBP10A4D1E9 387 aaKnown RBP31.85■■■□□ 2.69
CTDNEP1-208ENST00000573600 IGF2BP3O00425 579 aaKnown RBP eCLIP31.85■■■□□ 2.69
CTDNEP1-208ENST00000573600 MAPK13O15264 365 aa31.85■■■□□ 2.69
CTDNEP1-208ENST00000573600 CACNA2D4Q7Z3S7 1137 aa31.85■■■□□ 2.69
CTDNEP1-208ENST00000573600 SMARCAD1Q9H4L7 1026 aa31.85■■■□□ 2.69
CTDNEP1-208ENST00000573600 EPHB6O15197 1021 aa31.84■■■□□ 2.69
CTDNEP1-208ENST00000573600 SLC10A3P09131 477 aa31.84■■■□□ 2.69
CTDNEP1-208ENST00000573600 TAF1CQ15572 869 aaPredicted RBP31.84■■■□□ 2.69
CTDNEP1-208ENST00000573600 XXYLT1Q8NBI6 393 aa31.84■■■□□ 2.69
CTDNEP1-208ENST00000573600 COPS5Q92905 334 aa31.84■■■□□ 2.69
CTDNEP1-208ENST00000573600 MAML3Q96JK9 1138 aa31.84■■■□□ 2.69
CTDNEP1-208ENST00000573600 PRIMPOLQ96LW4 560 aa31.84■■■□□ 2.69
CTDNEP1-208ENST00000573600 ARHGAP28Q9P2N2 729 aa31.84■■■□□ 2.69
CTDNEP1-208ENST00000573600 CPA4Q9UI42 421 aa31.84■■■□□ 2.69
CTDNEP1-208ENST00000573600 PLAGL2Q9UPG8 496 aa31.84■■■□□ 2.69
CTDNEP1-208ENST00000573600 GH1P01241 217 aa31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 ARL2P36404 184 aa31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 MSL3Q8N5Y2 521 aaKnown RBP31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 ATP8B4Q8TF62 1192 aa31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 CHP1Q99653 195 aa31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 PLCB1Q9NQ66 1216 aa31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 MAFO75444 373 aaPredicted RBP31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 TERF1P54274 439 aa31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 GBP6Q6ZN66 633 aa31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 INTS8Q75QN2 995 aaKnown RBP31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 DESI2Q9BSY9 194 aa31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 KIFC3Q9BVG8 833 aa31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 KATNBL1Q9H079 304 aa31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 HSPBP1Q9NZL4 362 aa31.83■■■□□ 2.69
CTDNEP1-208ENST00000573600 GAS2O43903 313 aaKnown RBP31.82■■■□□ 2.68
CTDNEP1-208ENST00000573600 KRT13P13646 458 aa31.82■■■□□ 2.68
CTDNEP1-208ENST00000573600 NAMPTP43490 491 aa31.82■■■□□ 2.68
CTDNEP1-208ENST00000573600 ARHGAP1Q07960 439 aa31.82■■■□□ 2.68
CTDNEP1-208ENST00000573600 EXOC3L4Q17RC7 722 aa31.82■■■□□ 2.68
CTDNEP1-208ENST00000573600 BAP1Q92560 729 aa31.82■■■□□ 2.68
CTDNEP1-208ENST00000573600 TMEM143Q96AN5 459 aa31.82■■■□□ 2.68
CTDNEP1-208ENST00000573600 CRACR2AQ9BSW2 395 aa31.82■■■□□ 2.68
CTDNEP1-208ENST00000573600 PAXBP1Q9Y5B6 917 aa31.82■■■□□ 2.68
CTDNEP1-208ENST00000573600 EPN1Q9Y6I3 576 aaPredicted RBP31.82■■■□□ 2.68
CTDNEP1-208ENST00000573600 NOL4O94818 638 aa31.81■■■□□ 2.68
CTDNEP1-208ENST00000573600 SNAI1O95863 264 aaPredicted RBP31.81■■■□□ 2.68
CTDNEP1-208ENST00000573600 BFSP1Q12934 665 aa31.81■■■□□ 2.68
CTDNEP1-208ENST00000573600 CCDC170Q8IYT3 715 aa31.81■■■□□ 2.68
CTDNEP1-208ENST00000573600 EMID1Q96A84 441 aaPredicted RBP31.81■■■□□ 2.68
CTDNEP1-208ENST00000573600 CBWD1Q9BRT8 395 aa31.81■■■□□ 2.68
CTDNEP1-208ENST00000573600 TINF2Q9BSI4 451 aa31.81■■■□□ 2.68
CTDNEP1-208ENST00000573600 PCIF1Q9H4Z3 704 aa31.81■■■□□ 2.68
CTDNEP1-208ENST00000573600 ADGRA3Q8IWK6 1321 aa31.81■■■□□ 2.68
CTDNEP1-208ENST00000573600 CNGA1P29973 690 aa31.8■■■□□ 2.68
CTDNEP1-208ENST00000573600 BRDTQ58F21 947 aaPredicted RBP31.8■■■□□ 2.68
CTDNEP1-208ENST00000573600 PDXDC1Q6P996 788 aa31.8■■■□□ 2.68
CTDNEP1-208ENST00000573600 RRAGAQ7L523 313 aa31.8■■■□□ 2.68
CTDNEP1-208ENST00000573600 TLL2Q9Y6L7 1015 aa31.8■■■□□ 2.68
CTDNEP1-208ENST00000573600 NDUFA10O95299 355 aa31.8■■■□□ 2.68
CTDNEP1-208ENST00000573600 GLRA2P23416 452 aa31.8■■■□□ 2.68
CTDNEP1-208ENST00000573600 CYLC1P35663 651 aaPredicted RBP31.8■■■□□ 2.68
CTDNEP1-208ENST00000573600 PLCB4Q15147 1175 aa31.8■■■□□ 2.68
CTDNEP1-208ENST00000573600 IFNL1Q8IU54 200 aa31.8■■■□□ 2.68
CTDNEP1-208ENST00000573600 SYN2Q92777 582 aaPredicted RBP31.8■■■□□ 2.68
CTDNEP1-208ENST00000573600 JPH2Q9BR39 696 aaPredicted RBP31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms