RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 ELL2O00472 640 aaPredicted RBP6.53□□□□□ -1.36
CDC27-215ENST00000573550 NEMP1O14524 444 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 ID4P47928 161 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 BCAR1P56945 870 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 ADCY2Q08462 1091 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 STRN3Q13033 797 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 NFYCQ13952 458 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 ZNF568Q3ZCX4 644 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 BMP8AQ7Z5Y6 402 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 C11orf74Q86VG3 221 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 RTKN2Q8IZC4 609 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 SLC5A5Q92911 643 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 USP7Q93009 1102 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 OR10A2Q9H208 303 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 IFT22Q9H7X7 185 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 MAGEL2Q9UJ55 1249 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 MSRAQ9UJ68 235 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 VWA7Q9Y334 891 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 NCOA2Q15596 1464 aa6.53□□□□□ -1.36
CDC27-215ENST00000573550 MIA2Q96PC5 1412 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 WDR62O43379 1518 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 NPEPPSL1A6NEC2 478 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 PRRG2O14669 202 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 ARHGAP6O43182 974 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 LSP1P33241 339 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 MEOX1P50221 254 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 EFEMP1Q12805 493 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 DDB1Q16531 1140 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 DGKDQ16760 1214 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 ATP13A4Q4VNC1 1196 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 ZBTB41Q5SVQ8 909 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 BROXQ5VW32 411 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 TIGD7Q6NT04 549 aaPredicted RBP6.52□□□□□ -1.37
CDC27-215ENST00000573550 GLB1LQ6UWU2 654 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 USP30Q70CQ3 517 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 KRT26Q7Z3Y9 468 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 CFHR4Q92496 578 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 RPGRQ92834 1020 aaKnown RBP6.52□□□□□ -1.37
CDC27-215ENST00000573550 NKD2Q969F2 451 aaPredicted RBP6.52□□□□□ -1.37
CDC27-215ENST00000573550 NEIL1Q96FI4 390 aaPredicted RBP6.52□□□□□ -1.37
CDC27-215ENST00000573550 LMF1Q96S06 567 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 TTC1Q99614 292 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 MTG2Q9H4K7 406 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 JADE2Q9NQC1 790 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 SAE1Q9UBE0 346 aaPredicted RBP6.52□□□□□ -1.37
CDC27-215ENST00000573550 DENND2AQ9ULE3 1009 aa6.52□□□□□ -1.37
CDC27-215ENST00000573550 NESP48681 1621 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 A0A0A6YYJ9 748 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 ZEB2O60315 1214 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 OPHN1O60890 802 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 APOL3O95236 402 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 RAC3P60763 192 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 HGFACQ04756 655 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 ESPNLQ6ZVH7 1005 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 DNERQ8NFT8 737 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 GNRHR2Q96P88 292 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 LRRC37BQ96QE4 947 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 OAZ3Q9UMX2 235 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 APOBEC2Q9Y235 224 aaKnown RBP6.51□□□□□ -1.37
CDC27-215ENST00000573550 NR2E1Q9Y466 385 aa6.51□□□□□ -1.37
CDC27-215ENST00000573550 CTDP1Q9Y5B0 961 aaPredicted RBP6.51□□□□□ -1.37
CDC27-215ENST00000573550 MTUS2Q5JR59 1369 aa6.5□□□□□ -1.37
CDC27-215ENST00000573550 EYA4O95677 639 aa6.5□□□□□ -1.37
CDC27-215ENST00000573550 POU3F3P20264 500 aaPredicted RBP6.5□□□□□ -1.37
CDC27-215ENST00000573550 ADAM15Q13444 863 aa6.5□□□□□ -1.37
CDC27-215ENST00000573550 KLHDC10Q6PID8 442 aa6.5□□□□□ -1.37
CDC27-215ENST00000573550 CIR1Q86X95 450 aaPredicted RBP6.5□□□□□ -1.37
CDC27-215ENST00000573550 DYDC2Q96IM9 177 aa6.5□□□□□ -1.37
CDC27-215ENST00000573550 SAMD11Q96NU1 681 aa6.5□□□□□ -1.37
CDC27-215ENST00000573550 DPYSL5Q9BPU6 564 aa6.5□□□□□ -1.37
CDC27-215ENST00000573550 POLR3BQ9NW08 1133 aaPredicted RBP6.5□□□□□ -1.37
CDC27-215ENST00000573550 POLR1AO95602 1720 aaPredicted RBP6.5□□□□□ -1.37
CDC27-215ENST00000573550 KDM5BQ9UGL1 1544 aa6.5□□□□□ -1.37
CDC27-215ENST00000573550 NAIPQ13075 1403 aa6.5□□□□□ -1.37
CDC27-215ENST00000573550 MRC2Q9UBG0 1479 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 PATE3B3GLJ2 98 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 KDM1AO60341 852 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 DUSP8Q13202 625 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 CT47A1Q5JQC4 288 aaPredicted RBP6.49□□□□□ -1.37
CDC27-215ENST00000573550 FRMD7Q6ZUT3 714 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 RASSF3Q86WH2 238 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 CXorf67Q86X51 503 aaPredicted RBP6.49□□□□□ -1.37
CDC27-215ENST00000573550 TTC9BQ8N6N2 239 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 CLRN3Q8NCR9 226 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 OR14K1Q8NGZ2 314 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 FAM126AQ9BYI3 521 aaPredicted RBP6.49□□□□□ -1.37
CDC27-215ENST00000573550 KRTAP3-1Q9BYR8 98 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 TMX1Q9H3N1 280 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 FAM184BQ9ULE4 1060 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 PPP2R3BQ9Y5P8 575 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 ITSN2Q9NZM3 1697 aa6.49□□□□□ -1.37
CDC27-215ENST00000573550 DNMT1P26358 1616 aaKnown RBP6.48□□□□□ -1.37
CDC27-215ENST00000573550 ADCY10Q96PN6 1610 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 A0A0A6YYK5 440 aaPredicted RBP6.48□□□□□ -1.37
CDC27-215ENST00000573550 BRINP1O60477 761 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 PFKMP08237 780 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 CR2P20023 1033 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 BUD31P41223 144 aaPredicted RBP6.48□□□□□ -1.37
CDC27-215ENST00000573550 MANFP55145 182 aaKnown RBP6.48□□□□□ -1.37
CDC27-215ENST00000573550 SESN2P58004 480 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms