RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 EMC2Q15006 297 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 NAALADL2Q58DX5 795 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 TWF2Q6IBS0 349 aaKnown RBP14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 CATSPER4Q7RTX7 472 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 ECHDC2Q86YB7 292 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 THNSL1Q8IYQ7 743 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 POF1BQ8WVV4 589 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 PSPC1Q8WXF1 523 aaKnown RBP14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 TBC1D32Q96NH3 1257 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 DACT1Q9NYF0 836 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 PIN4Q9Y237 131 aaKnown RBP14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 PPME1Q9Y570 386 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 COL4A3BPQ9Y5P4 624 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 KIAA1671Q9BY89 1806 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 POTEMA6NI47 508 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 ST18O60284 1047 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 CD2BP2O95400 341 aaKnown RBP14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 DNAJB1P25685 340 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 ZNF174Q15697 407 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 LEXMQ3ZCV2 418 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 COLGALT1Q8NBJ5 622 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 SPPL3Q8TCT6 385 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 NEK9Q8TD19 979 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 HELQQ8TDG4 1101 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 MICAL1Q8TDZ2 1067 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 TCP11Q8WWU5 503 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 PRPF31Q8WWY3 499 aaKnown RBP14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 PABPC5Q96DU9 382 aaKnown RBP14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 MTMR9Q96QG7 549 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 MTRQ99707 1265 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 TMEM117Q9H0C3 514 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 TMEM60Q9H2L4 133 aa14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 DHX33Q9H6R0 707 aaKnown RBP14.18□□□□□ -0.14
NPLOC4-213ENST00000573519 A0A0U1RQF3 1178 aa14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 LAG3P18627 525 aa14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 IRS1P35568 1242 aa14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 LAMTOR4Q0VGL1 99 aa14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 HYAL1Q12794 435 aa14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 CAMK1Q14012 370 aa14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 LONRF3Q496Y0 759 aa14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 PTCRAQ6ISU1 281 aaPredicted RBP14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 LRRC43Q8N309 656 aa14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 FBXO18Q8NFZ0 1043 aa14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 PPP2R3CQ969Q6 453 aa14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 CASD1Q96PB1 797 aa14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 FOXP1Q9H334 677 aaPredicted RBP14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 CHST12Q9NRB3 414 aa14.17□□□□□ -0.14
NPLOC4-213ENST00000573519 A0A087WWV3 80 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 NCK2O43639 380 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 GAS2O43903 313 aaKnown RBP14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 FGF18O76093 207 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 EOMESO95936 686 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 GTF2F1P35269 517 aaKnown RBP eCLIP14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 TECP42680 631 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 PHKA2P46019 1235 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 CLUL1Q15846 466 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 CLLU1OSQ5K130 101 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 TTC38Q5R3I4 469 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 LRRC55Q6ZSA7 311 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 RBM23Q86U06 439 aaKnown RBP14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 NOSTRINQ8IVI9 506 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 RNF149Q8NC42 400 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 PIGOQ8TEQ8 1089 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 HSD17B14Q9BPX1 270 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 CWH43Q9H720 699 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 IFT122Q9HBG6 1241 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 RNF19AQ9NV58 838 aa14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 NOL7Q9UMY1 257 aaKnown RBP14.16□□□□□ -0.14
NPLOC4-213ENST00000573519 TCF20Q9UGU0 1960 aaKnown RBP14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 FNDC1Q4ZHG4 1894 aaPredicted RBP14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 LINC01565O15544 149 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 ASAP2O43150 1006 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 OR52Z1P0C646 297 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 SKIP12755 728 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 IL9P15248 144 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 ATF7P17544 494 aaPredicted RBP14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 PBX3P40426 434 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 NRIP1P48552 1158 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 CSPP1Q1MSJ5 1256 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 SRGAP1Q7Z6B7 1085 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 ADGRD2Q7Z7M1 963 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 FERMT3Q86UX7 667 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 LPPQ93052 612 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 TMX3Q96JJ7 454 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 ZNF558Q96NG5 402 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 BACH2Q9BYV9 841 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 TLR9Q9NR96 1032 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 ANKEF1Q9NU02 776 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 FAM105AQ9NUU6 356 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 INPP5FQ9Y2H2 1132 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 PCDHGC5Q9Y5F6 944 aa14.15□□□□□ -0.14
NPLOC4-213ENST00000573519 USO1O60763 962 aaKnown RBP14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 DGAT1O75907 488 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 ERLIN2O94905 339 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 LYPLA2O95372 231 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 NDUFV1P49821 464 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 UBE3AQ05086 875 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 TFDP1Q14186 410 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 MXD4Q14582 209 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms