RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 ARL8AQ96BM9 186 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 FOXRED1Q96CU9 486 aaPredicted RBP4.44□□□□□ -1.7
TVP23B-205ENST00000572845 PTGFRNQ9P2B2 879 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 ZNHIT2Q9UHR6 403 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 PFDN2Q9UHV9 154 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.43□□□□□ -1.7
TVP23B-205ENST00000572845 KLRG2A4D1S0 409 aaPredicted RBP4.43□□□□□ -1.7
TVP23B-205ENST00000572845 PPM1GO15355 546 aaPredicted RBP4.43□□□□□ -1.7
TVP23B-205ENST00000572845 FAM20BO75063 409 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 CLSTN1O94985 981 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 STAT3P40763 770 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 BCAR1P56945 870 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 ADAM8P78325 824 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 IRF9Q00978 393 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 HNRNPA0Q13151 305 aaKnown RBP4.43□□□□□ -1.7
TVP23B-205ENST00000572845 DCAF17Q5H9S7 520 aaPredicted RBP4.43□□□□□ -1.7
TVP23B-205ENST00000572845 CLEC14AQ86T13 490 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 RTN4RL1Q86UN2 441 aaPredicted RBP4.43□□□□□ -1.7
TVP23B-205ENST00000572845 PRIMA1Q86XR5 153 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 GSTCDQ8NEC7 633 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 PROKR1Q8TCW9 393 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 NKD2Q969F2 451 aaPredicted RBP4.43□□□□□ -1.7
TVP23B-205ENST00000572845 MAML3Q96JK9 1138 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 EXOC2Q96KP1 924 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 ZNF512Q96ME7 567 aaPredicted RBP4.43□□□□□ -1.7
TVP23B-205ENST00000572845 WDR92Q96MX6 357 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 PSMD1Q99460 953 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 BOCQ9BWV1 1114 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 TOR3AQ9H497 397 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 ACSS2Q9NR19 701 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 SIRPGQ9P1W8 387 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 NDOR1Q9UHB4 597 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 COQ6Q9Y2Z9 468 aa4.43□□□□□ -1.7
TVP23B-205ENST00000572845 ARID4BQ4LE39 1312 aaPredicted RBP4.43□□□□□ -1.7
TVP23B-205ENST00000572845 ZAR1LA6NP61 321 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 B3GALT2O43825 422 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 CYP17A1P05093 508 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 FAM153BP0C7A2 387 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 GNAT2P19087 354 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 NPEPPSP55786 919 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 IRX6P78412 446 aaPredicted RBP4.42□□□□□ -1.7
TVP23B-205ENST00000572845 SLC6A3Q01959 620 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 ACAP1Q15027 740 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 CSRP2Q16527 193 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 TM4SF20Q53R12 229 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 TRIM61Q5EBN2 209 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 METTL24Q5JXM2 366 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 STRIP1Q5VSL9 837 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 LRCH2Q5VUJ6 765 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 SYCE2Q6PIF2 218 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 KCNV1Q6PIU1 500 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 TMED8Q6PL24 325 aaPredicted RBP4.42□□□□□ -1.7
TVP23B-205ENST00000572845 OTOP1Q7RTM1 612 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 APBB1IPQ7Z5R6 666 aaPredicted RBP4.42□□□□□ -1.7
TVP23B-205ENST00000572845 BMP8AQ7Z5Y6 402 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 CMTM4Q8IZR5 234 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 OR5AN1Q8NGI8 311 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 ST8SIA2Q92186 375 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 DYDC2Q96IM9 177 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 CCDC136Q96JN2 1154 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 C14orf93Q9H972 538 aaKnown RBP4.42□□□□□ -1.7
TVP23B-205ENST00000572845 SLC52A2Q9HAB3 445 aa4.42□□□□□ -1.7
TVP23B-205ENST00000572845 PPP1R1BQ9UD71 204 aaPredicted RBP4.42□□□□□ -1.7
TVP23B-205ENST00000572845 MTSS1O43312 755 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 DIAPH1O60610 1272 aaKnown RBP4.41□□□□□ -1.7
TVP23B-205ENST00000572845 TOX4O94842 621 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 PRLP01236 227 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 CD38P28907 300 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 SPIDRQ14159 915 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 MAN2A1Q16706 1144 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 TMEM177Q53S58 311 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 TTC38Q5R3I4 469 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 IQSEC1Q6DN90 963 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 SLFN12LQ6IEE8 588 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 LRRC55Q6ZSA7 311 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 LRP10Q7Z4F1 713 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 ELOA2Q8IYF1 753 aaPredicted RBP4.41□□□□□ -1.7
TVP23B-205ENST00000572845 GPR150Q8NGU9 434 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 SLC7A14Q8TBB6 771 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 RPGRQ92834 1020 aaKnown RBP4.41□□□□□ -1.7
TVP23B-205ENST00000572845 ZNF764Q96H86 408 aaPredicted RBP4.41□□□□□ -1.7
TVP23B-205ENST00000572845 C16orf92Q96LL3 132 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 FAM193BQ96PV7 902 aaPredicted RBP4.41□□□□□ -1.7
TVP23B-205ENST00000572845 CYP4F11Q9HBI6 524 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 COL4A3Q01955 1670 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 KDM2BQ8NHM5 1336 aa4.41□□□□□ -1.7
TVP23B-205ENST00000572845 B4E1Z4 1266 aa4.4□□□□□ -1.71
TVP23B-205ENST00000572845 TRIM24O15164 1050 aa4.4□□□□□ -1.71
TVP23B-205ENST00000572845 KCNQ2O43526 872 aa4.4□□□□□ -1.71
TVP23B-205ENST00000572845 ZBTB48P10074 688 aaPredicted RBP4.4□□□□□ -1.71
TVP23B-205ENST00000572845 KIR2DL3P43628 341 aa4.4□□□□□ -1.71
TVP23B-205ENST00000572845 ANTXR2P58335 489 aa4.4□□□□□ -1.71
TVP23B-205ENST00000572845 TIGD2Q4W5G0 525 aa4.4□□□□□ -1.71
TVP23B-205ENST00000572845 PLEKHG4Q58EX7 1191 aa4.4□□□□□ -1.71
TVP23B-205ENST00000572845 VRK3Q8IV63 474 aa4.4□□□□□ -1.71
TVP23B-205ENST00000572845 MRPL4Q9BYD3 311 aaKnown RBP4.4□□□□□ -1.71
TVP23B-205ENST00000572845 OSBPL6Q9BZF3 934 aa4.4□□□□□ -1.71
TVP23B-205ENST00000572845 POLR3BQ9NW08 1133 aaPredicted RBP4.4□□□□□ -1.71
TVP23B-205ENST00000572845 SFMBT1Q9UHJ3 866 aa4.4□□□□□ -1.71
TVP23B-205ENST00000572845 HS3ST4Q9Y661 456 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms