RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 MOSPD1Q9UJG1 213 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 AKT3Q9Y243 479 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 EMC9Q9Y3B6 208 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 PCDHGB5Q9Y5G0 923 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 PCDHA11Q9Y5I1 949 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 SNX8Q9Y5X2 465 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 EPN1Q9Y6I3 576 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 ASXL2Q76L83 1435 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 PTPDC1A2A3K4 754 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 SGSM2O43147 1006 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 MMP20O60882 483 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 DGKIO75912 1065 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 USP1O94782 785 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 APBB3O95704 486 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 PSAPP07602 524 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 ACPPP15309 386 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 PORP16435 677 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 AGXTP21549 392 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 SERPINF1P36955 418 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 HADHAP40939 763 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 FXR1P51114 621 aaKnown RBP eCLIP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 MECP2P51608 486 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 GFRA1P56159 465 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 PHC1P78364 1004 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 IFI35P80217 286 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 TYRO3Q06418 890 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 TFCP2Q12800 502 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 SNAPC2Q13487 334 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 PMS2P11Q13670 270 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 AUHQ13825 339 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 PTK2BQ14289 1009 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 SMAD2Q15796 467 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 ARHGAP44Q17R89 818 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 UAP1L1Q3KQV9 507 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 ANKDD1AQ495B1 522 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 TMEM177Q53S58 311 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 WIPI1Q5MNZ9 446 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 SPRYD7Q5W111 196 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 NAA16Q6N069 864 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 ZNF783Q6ZMS7 281 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 USP53Q70EK8 1073 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 B4GALNT4Q76KP1 1039 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 ZNF765Q7L2R6 523 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 MTDHQ86UE4 582 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 MOGAT3Q86VF5 341 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 CPOQ8IVL8 374 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 ZC3H7AQ8IWR0 971 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 TBC1D21Q8IYX1 336 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 CCDC33Q8N5R6 958 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 CEP70Q8NHQ1 597 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 DENND1AQ8TEH3 1009 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 TTC9Q92623 222 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 ZNF566Q969W8 418 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 BICD1Q96G01 975 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 RCC1LQ96I51 464 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 ACAP3Q96P50 834 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 ORAI2Q96SN7 254 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 CELF4Q9BZC1 486 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 SENP6Q9GZR1 1112 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 ADAM19Q9H013 955 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 OBP2BQ9NPH6 170 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 TOMM22Q9NS69 142 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 INTS10Q9NVR2 710 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 RBM28Q9NW13 759 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 DNAJC28Q9NX36 388 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 UTP6Q9NYH9 597 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 TLR7Q9NYK1 1049 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 USP36Q9P275 1121 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 KLHL3Q9UH77 587 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 ANGPTL3Q9Y5C1 460 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 PCDHA8Q9Y5H6 950 aa5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 EIF4G1Q04637 1599 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-210ENST00000572787 C2orf81A6NN90 581 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 BOLA2-SMG1P6H3BVE0 249 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 ARVCFO00192 962 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 APOL1O14791 398 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 NPC1O15118 1278 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 ST8SIA5O15466 376 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 TGM5O43548 720 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 SRGAP2O75044 1071 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 NDUFS2O75306 463 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 PTP4A3O75365 173 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 SASH3O75995 380 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 IL18RAPO95256 599 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 B3GALT4O96024 378 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 ALDH2P05091 517 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 MSL3P1P0C860 447 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 ZSCAN22P10073 491 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 HARSP12081 509 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 PTGIRP43119 386 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 AFF3P51826 1226 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 NLRP12P59046 1061 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 IL1RL1Q01638 556 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 PPARDQ03181 441 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 BFSP1Q12934 665 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 NR5A1Q13285 461 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 WTAPQ15007 396 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 ANKRD1Q15327 319 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 SMAD1Q15797 465 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 C4orf17Q53FE4 359 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms