RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 MTHFRP42898 656 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 NTRK3Q16288 839 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 LRCH2Q5VUJ6 765 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 FBXL16Q8N461 479 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 RDM1Q8NG50 284 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 ATOH1Q92858 354 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 TMEM169Q96HH4 297 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 TRAIPQ9BWF2 469 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 TEKT3Q9BXF9 490 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 RNF26Q9BY78 433 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 NIFKQ9BYG3 293 aaKnown RBP11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 UNC45AQ9H3U1 944 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 POMKQ9H5K3 350 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 FAM86C1Q9NVL1 165 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 DZANK1Q9NVP4 752 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 PLXNA4Q9HCM2 1894 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 IGKV6-21A0A0C4DH24 114 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 GFRA3O60609 400 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 CDC45O75419 566 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 CSDE1O75534 798 aaKnown RBP11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 PSMD10O75832 226 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 BRD1O95696 1058 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 SKIP12755 728 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 IFNAR1P17181 557 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 SFPQP23246 707 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 CA8P35219 290 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 PHKA2P46019 1235 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 DNM2P50570 870 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 POLGP54098 1239 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 DRP2Q13474 957 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 GIT2Q14161 759 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 Q4G0T1 1027 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 XKR3Q5GH77 459 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 BLOC1S2Q6QNY1 142 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 DDX53Q86TM3 631 aaKnown RBP11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 ZDHHC14Q8IZN3 488 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 VPS52Q8N1B4 723 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 TMEM87AQ8NBN3 555 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 JAKMIP1Q96N16 626 aaKnown RBP11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 CEP89Q96ST8 783 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 SLC26A6Q9BXS9 759 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 INO80BQ9C086 356 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 ZBP1Q9H171 429 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 SH3GLB2Q9NR46 395 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 VPS54Q9P1Q0 977 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 IRAK3Q9Y616 596 aa11.11□□□□□ -0.63
TRAPPC1-205ENST00000572656 CYP3A7-CYP3A51PA0A087WV96 503 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 A0A087WZ62 844 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 H0Y858 1186 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 GALR2O43603 387 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 ZC3H11AO75152 810 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 STBD1O95210 358 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 WEE2P0C1S8 567 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 CTSAP10619 480 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 CYP3A7P24462 503 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 MTERF2Q49AM1 385 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 ATAT1Q5SQI0 421 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 RARS2Q5T160 578 aaKnown RBP11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 TWF2Q6IBS0 349 aaKnown RBP11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 KIAA1841Q6NSI8 718 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 GLB1LQ6UWU2 654 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 B3GNT9Q6UX72 402 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 MIER3Q7Z3K6 550 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 ZNF410Q86VK4 478 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 SKAP1Q86WV1 359 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 TMEM173Q86WV6 379 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 PLCD3Q8N3E9 789 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 C12orf76Q8N812 135 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 TDRD5Q8NAT2 981 aaKnown RBP11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 TBCKQ8TEA7 893 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 GJA10Q969M2 543 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 IGSF21Q96ID5 467 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 FDXACB1Q9BRP7 624 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 AGXT2Q9BYV1 514 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 C22orf23Q9BZE7 217 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 SUCLA2Q9P2R7 463 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 SEPT9Q9UHD8 586 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 USTQ9Y2C2 406 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 SNX14Q9Y5W7 946 aa11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-205ENST00000572656 TMEM150BA6NC51 233 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 PROB1E7EW31 1015 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 ZNF623O75123 536 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 MAFO75444 373 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 OFD1O75665 1012 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 GALTP07902 379 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 EPCAMP16422 314 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 RPS6KB1P23443 525 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 HSPA4P34932 840 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 RAB27AP51159 221 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 EVCP57679 992 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 NLRP5P59047 1200 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 NOMO2Q5JPE7 1267 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 CENPQQ7L2Z9 268 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 RHPN2Q8IUC4 686 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 SLC22A17Q8WUG5 538 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 AUTS2Q8WXX7 1259 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 LPPQ93052 612 aa11.09□□□□□ -0.63
TRAPPC1-205ENST00000572656 NRDE2Q9H7Z3 1164 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms