RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 NRIP1P48552 1158 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 NDUFV1P49821 464 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 EPHA7Q15375 998 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 CLLU1OSQ5K130 101 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 NCAPH2Q6IBW4 605 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 RBM23Q86U06 439 aaKnown RBP19.41■□□□□ 0.7
LITAF-211ENST00000572255 KSR1Q8IVT5 923 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 LRRC43Q8N309 656 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 EFHBQ8N7U6 833 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 ZNF579Q8NAF0 562 aaKnown RBP19.41■□□□□ 0.7
LITAF-211ENST00000572255 MICAL1Q8TDZ2 1067 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 TLR9Q9NR96 1032 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 PRKAG3Q9UGI9 489 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 CD207Q9UJ71 328 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 ARID2Q68CP9 1835 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 PI4K2BG5E9Z4 385 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 MBTPS2O43462 519 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 JAK2O60674 1132 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 BAG4O95429 457 aaKnown RBP19.4■□□□□ 0.7
LITAF-211ENST00000572255 EOMESO95936 686 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 ATF7P17544 494 aaPredicted RBP19.4■□□□□ 0.7
LITAF-211ENST00000572255 ZP2Q05996 745 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 SPIRE1Q08AE8 756 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 SMAD4Q13485 552 aaKnown RBP19.4■□□□□ 0.7
LITAF-211ENST00000572255 ZNF598Q86UK7 904 aaKnown RBP19.4■□□□□ 0.7
LITAF-211ENST00000572255 SLFN12Q8IYM2 578 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 SLC7A3Q8WY07 619 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 CEP170P1Q96L14 293 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 NLRP4Q96MN2 994 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 LXNQ9BS40 222 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 INO80BQ9C086 356 aaPredicted RBP19.4■□□□□ 0.7
LITAF-211ENST00000572255 TLE6Q9H808 572 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 CHST12Q9NRB3 414 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 RGL1Q9NZL6 768 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 RAPGEFL1Q9UHV5 662 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 PPME1Q9Y570 386 aa19.4■□□□□ 0.7
LITAF-211ENST00000572255 FOSBP53539 338 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 POLGP54098 1239 aaPredicted RBP19.39■□□□□ 0.69
LITAF-211ENST00000572255 ERVFC1P60507 584 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 PLCB3Q01970 1234 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 SMAD2Q15796 467 aaKnown RBP19.39■□□□□ 0.69
LITAF-211ENST00000572255 KCNT2Q6UVM3 1135 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 ADHFE1Q8IWW8 467 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 C4orf19Q8IY42 314 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 EXOC8Q8IYI6 725 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 HELQQ8TDG4 1101 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 DYDC2Q96IM9 177 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 MSLNLQ96KJ4 702 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 ZNF558Q96NG5 402 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 DHX33Q9H6R0 707 aaKnown RBP19.39■□□□□ 0.69
LITAF-211ENST00000572255 CLEC1BQ9P126 229 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 LZTS1Q9Y250 596 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 COL4A3BPQ9Y5P4 624 aa19.39■□□□□ 0.69
LITAF-211ENST00000572255 BTBD18B2RXH4 712 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 FSCN2O14926 492 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 GLP2RO95838 553 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 YWHABP31946 246 aaKnown RBP19.38■□□□□ 0.69
LITAF-211ENST00000572255 PBX3P40426 434 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 RFC5P40937 340 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 PHKA2P46019 1235 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 CYP4A11Q02928 519 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 ST3GAL1Q11201 340 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 TRIM29Q14134 588 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 TMEM31Q5JXX7 168 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 TWF2Q6IBS0 349 aaKnown RBP19.38■□□□□ 0.69
LITAF-211ENST00000572255 PDE12Q6L8Q7 609 aaKnown RBP19.38■□□□□ 0.69
LITAF-211ENST00000572255 CATSPER4Q7RTX7 472 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 DIS3L2Q8IYB7 885 aaKnown RBP19.38■□□□□ 0.69
LITAF-211ENST00000572255 MRPS27Q92552 414 aaKnown RBP19.38■□□□□ 0.69
LITAF-211ENST00000572255 LRFN3Q9BTN0 628 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 TRAIPQ9BWF2 469 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 ZSWIM4Q9H7M6 989 aa19.38■□□□□ 0.69
LITAF-211ENST00000572255 PIN4Q9Y237 131 aaKnown RBP19.38■□□□□ 0.69
LITAF-211ENST00000572255 C19orf67A6NJJ6 358 aa19.37■□□□□ 0.69
LITAF-211ENST00000572255 PER2O15055 1255 aa19.37■□□□□ 0.69
LITAF-211ENST00000572255 PPM1AP35813 382 aa19.37■□□□□ 0.69
LITAF-211ENST00000572255 CTTNQ14247 550 aaKnown RBP19.37■□□□□ 0.69
LITAF-211ENST00000572255 CALCRLQ16602 461 aa19.37■□□□□ 0.69
LITAF-211ENST00000572255 XKR9Q5GH70 373 aa19.37■□□□□ 0.69
LITAF-211ENST00000572255 OTUD6AQ7L8S5 288 aa19.37■□□□□ 0.69
LITAF-211ENST00000572255 PRPF31Q8WWY3 499 aaKnown RBP19.37■□□□□ 0.69
LITAF-211ENST00000572255 PSPC1Q8WXF1 523 aaKnown RBP19.37■□□□□ 0.69
LITAF-211ENST00000572255 TMEM143Q96AN5 459 aa19.37■□□□□ 0.69
LITAF-211ENST00000572255 MRPL9Q9BYD2 267 aaKnown RBP19.37■□□□□ 0.69
LITAF-211ENST00000572255 IFT122Q9HBG6 1241 aa19.37■□□□□ 0.69
LITAF-211ENST00000572255 C11orf16Q9NQ32 467 aa19.37■□□□□ 0.69
LITAF-211ENST00000572255 BMP2KQ9NSY1 1161 aaPredicted RBP19.37■□□□□ 0.69
LITAF-211ENST00000572255 SPG21Q9NZD8 308 aa19.37■□□□□ 0.69
LITAF-211ENST00000572255 PUF60Q9UHX1 559 aaKnown RBP19.37■□□□□ 0.69
LITAF-211ENST00000572255 BARX2Q9UMQ3 279 aaPredicted RBP19.37■□□□□ 0.69
LITAF-211ENST00000572255 FAM86C2PA6NEL3 165 aa19.36■□□□□ 0.69
LITAF-211ENST00000572255 WNT7AO00755 349 aa19.36■□□□□ 0.69
LITAF-211ENST00000572255 ZBTB39O15060 712 aa19.36■□□□□ 0.69
LITAF-211ENST00000572255 GPR37L1O60883 481 aa19.36■□□□□ 0.69
LITAF-211ENST00000572255 EYA4O95677 639 aa19.36■□□□□ 0.69
LITAF-211ENST00000572255 SKIP12755 728 aa19.36■□□□□ 0.69
LITAF-211ENST00000572255 EMC2Q15006 297 aa19.36■□□□□ 0.69
LITAF-211ENST00000572255 DUSP6Q16828 381 aa19.36■□□□□ 0.69
LITAF-211ENST00000572255 PLPP4Q5VZY2 271 aa19.36■□□□□ 0.69
LITAF-211ENST00000572255 TPH2Q8IWU9 490 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms