RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 FAM167AQ96KS9 214 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 SCLT1Q96NL6 688 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 ANO3Q9BYT9 981 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 ADAMTS10Q9H324 1103 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 TBC1D22BQ9NU19 505 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 MAFBQ9Y5Q3 323 aaPredicted RBP12.85□□□□□ -0.35
CHMP6-202ENST00000571457 TAF6LQ9Y6J9 622 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 R4GN57 208 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 IPO5O00410 1097 aaKnown RBP12.84□□□□□ -0.35
CHMP6-202ENST00000571457 PRC1O43663 620 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 PSAPP07602 524 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 SKIP12755 728 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 DARSP14868 501 aaKnown RBP12.84□□□□□ -0.35
CHMP6-202ENST00000571457 KLRC2P26717 231 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 LIFRP42702 1097 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 ADCY7P51828 1080 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 TBC1D8BQ0IIM8 1120 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 AP3B2Q13367 1082 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 ZNF746Q6NUN9 644 aaPredicted RBP12.84□□□□□ -0.35
CHMP6-202ENST00000571457 GLB1LQ6UWU2 654 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 TMTC3Q6ZXV5 915 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 PLA2G4DQ86XP0 818 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 SMAP1Q8IYB5 467 aaPredicted RBP12.84□□□□□ -0.35
CHMP6-202ENST00000571457 FANCBQ8NB91 859 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 STAMQ92783 540 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 NXPE3Q969Y0 559 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 CHST12Q9NRB3 414 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 DLL3Q9NYJ7 618 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 DPP7Q9UHL4 492 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 SLC12A7Q9Y666 1083 aa12.84□□□□□ -0.35
CHMP6-202ENST00000571457 hCG_1984214I3L0E3 225 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 SH2B2O14492 632 aaPredicted RBP12.83□□□□□ -0.36
CHMP6-202ENST00000571457 DHX15O43143 795 aaKnown RBP12.83□□□□□ -0.36
CHMP6-202ENST00000571457 CFHP08603 1231 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 RXRAP19793 462 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 SDHBP21912 280 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 GPC3P51654 580 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 CDC42EP1Q00587 391 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 RNASELQ05823 741 aaKnown RBP12.83□□□□□ -0.36
CHMP6-202ENST00000571457 PTPN14Q15678 1187 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 WWC2Q6AWC2 1192 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 CYP26C1Q6V0L0 522 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 TRMT1LQ7Z2T5 733 aaKnown RBP12.83□□□□□ -0.36
CHMP6-202ENST00000571457 LINC01465Q8N7H1 131 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 ZNF713Q8N859 430 aaPredicted RBP12.83□□□□□ -0.36
CHMP6-202ENST00000571457 PGBD1Q96JS3 809 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 TRAIPQ9BWF2 469 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 PCDHA10Q9Y5I2 948 aa12.83□□□□□ -0.36
CHMP6-202ENST00000571457 MAP1BP46821 2468 aaKnown RBP12.83□□□□□ -0.36
CHMP6-202ENST00000571457 CACNA1IQ9P0X4 2223 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 NARSO43776 548 aaKnown RBP12.82□□□□□ -0.36
CHMP6-202ENST00000571457 GALTP07902 379 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 GBP2P32456 591 aaPredicted RBP12.82□□□□□ -0.36
CHMP6-202ENST00000571457 PHKA2P46019 1235 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 CLCN4P51793 760 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 SETQ01105 290 aaPredicted RBP12.82□□□□□ -0.36
CHMP6-202ENST00000571457 NOMO2Q5JPE7 1267 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 PHLDB3Q6NSJ2 640 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 TMEM173Q86WV6 379 aaPredicted RBP12.82□□□□□ -0.36
CHMP6-202ENST00000571457 LRRC71Q8N4P6 559 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 CMASQ8NFW8 434 aaPredicted RBP12.82□□□□□ -0.36
CHMP6-202ENST00000571457 NLRP7Q8WX94 980 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 RIN2Q8WYP3 895 aaPredicted RBP12.82□□□□□ -0.36
CHMP6-202ENST00000571457 MAP4K1Q92918 833 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 BORCS6Q96GS4 357 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 ZNF577Q9BSK1 485 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 RHOBTB2Q9BYZ6 727 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 TBC1D17Q9HA65 648 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 NRBP2Q9NSY0 501 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 GABBR1Q9UBS5 961 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 SIT1Q9Y3P8 196 aa12.82□□□□□ -0.36
CHMP6-202ENST00000571457 KRBA1A5PL33 1030 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 SMCO2A6NFE2 343 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 FAM86B1E9PN63 330 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 FAM86B2P0C5J1 330 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 SRFP11831 508 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 CHMLP26374 656 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 TWF2Q6IBS0 349 aaKnown RBP12.81□□□□□ -0.36
CHMP6-202ENST00000571457 MICU3Q86XE3 530 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 C1orf210Q8IVY1 113 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 SLC44A3Q8N4M1 653 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 KLHL5Q96PQ7 755 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 GCOM2Q9BZD3 368 aaPredicted RBP12.81□□□□□ -0.36
CHMP6-202ENST00000571457 NRDE2Q9H7Z3 1164 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 WDR6Q9NNW5 1121 aaKnown RBP12.81□□□□□ -0.36
CHMP6-202ENST00000571457 MRPL17Q9NRX2 175 aaKnown RBP12.81□□□□□ -0.36
CHMP6-202ENST00000571457 TBC1D13Q9NVG8 400 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 RBM28Q9NW13 759 aaKnown RBP12.81□□□□□ -0.36
CHMP6-202ENST00000571457 EPS15L1Q9UBC2 864 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 CA14Q9ULX7 337 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 SAMM50Q9Y512 469 aa12.81□□□□□ -0.36
CHMP6-202ENST00000571457 IGLV3-22A0A075B6J6 115 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 WDR64B1ANS9 1081 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 OATP04181 439 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 CYP3A4P08684 503 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 CNPP09543 421 aaKnown RBP12.8□□□□□ -0.36
CHMP6-202ENST00000571457 SP9P0CG40 484 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 SFPQP23246 707 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHMP6-202ENST00000571457 RAB27AP51159 221 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms