RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 KNOP1Q1ED39 458 aaKnown RBP13.14□□□□□ -0.31
CDRT1-206ENST00000571263 TAF2Q6P1X5 1199 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 HAUS6Q7Z4H7 955 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 ZBTB8OSQ8IWT0 167 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 METTL13Q8N6R0 699 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 DEPTORQ8TB45 409 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 SH3TC2Q8TF17 1288 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 NELFBQ8WX92 580 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 LENG1Q96BZ8 264 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-206ENST00000571263 ACCSQ96QU6 501 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 STRA6Q9BX79 667 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 NFKBIZQ9BYH8 718 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 RBSNQ9H1K0 784 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 PRDM10Q9NQV6 1147 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 ARID2Q68CP9 1835 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 MYADML2A6NDP7 307 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 K7ENM7 598 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 DNM1LO00429 736 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 CCL5P13501 91 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 RPL13P26373 211 aaKnown RBP13.13□□□□□ -0.31
CDRT1-206ENST00000571263 HOXC8P31273 242 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 IGBP1P78318 339 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 ADAM17P78536 824 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 SPAG1Q07617 926 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 PCBP1Q15365 356 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDRT1-206ENST00000571263 NFIL3Q16649 462 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 EDRF1Q3B7T1 1238 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 KLHL10Q6JEL2 608 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 CXCL17Q6UXB2 119 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 HS2ST1Q7LGA3 356 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 RSPH3Q86UC2 560 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 ZNF410Q86VK4 478 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 FAM114A1Q8IWE2 563 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 SMYD4Q8IYR2 804 aaPredicted RBP13.13□□□□□ -0.31
CDRT1-206ENST00000571263 LINC01465Q8N7H1 131 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 ANKRD20A12PQ8NF67 263 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 TMEM174Q8WUU8 243 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 SCFD1Q8WVM8 642 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 PRPF31Q8WWY3 499 aaKnown RBP13.13□□□□□ -0.31
CDRT1-206ENST00000571263 ANP32BQ92688 251 aaKnown RBP13.13□□□□□ -0.31
CDRT1-206ENST00000571263 TMEM143Q96AN5 459 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 ARMC5Q96C12 935 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 FIZ1Q96SL8 496 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 RNF208Q9H0X6 261 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 GRPEL1Q9HAV7 217 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 GPRC5CQ9NQ84 441 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 TYW1Q9NV66 732 aaKnown RBP13.13□□□□□ -0.31
CDRT1-206ENST00000571263 SETD4Q9NVD3 440 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 TBC1D7Q9P0N9 293 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 GTF2IRD1Q9UHL9 959 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 OGDHLQ9ULD0 1010 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 MAPK8IP1Q9UQF2 711 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 TRAF3IP3Q9Y228 551 aa13.13□□□□□ -0.31
CDRT1-206ENST00000571263 K7ERI5 159 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 PPP1R37O75864 691 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 GNA14O95837 355 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 CYP2C9P11712 490 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 GLRA2P23416 452 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 NMT1P30419 496 aaKnown RBP13.12□□□□□ -0.31
CDRT1-206ENST00000571263 FKBP3Q00688 224 aaKnown RBP13.12□□□□□ -0.31
CDRT1-206ENST00000571263 LAMTOR4Q0VGL1 99 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 STRN3Q13033 797 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 NBPF20Q3BBV1 942 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 MARCH8Q5T0T0 291 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
CDRT1-206ENST00000571263 DHX40Q8IX18 779 aaKnown RBP13.12□□□□□ -0.31
CDRT1-206ENST00000571263 SYCP3Q8IZU3 236 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 AOPEPQ8N6M6 819 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 RNF214Q8ND24 703 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 TMEM161BQ8NDZ6 487 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 LMBR1Q8WVP7 490 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 HPS3Q969F9 1004 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 VTI1AQ96AJ9 217 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 INO80BQ9C086 356 aaPredicted RBP13.12□□□□□ -0.31
CDRT1-206ENST00000571263 GBP3Q9H0R5 595 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 UNC93B1Q9H1C4 597 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 ARHGAP28Q9P2N2 729 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 HDAC6Q9UBN7 1215 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 PHF24Q9UPV7 400 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 CTNND2Q9UQB3 1225 aa13.12□□□□□ -0.31
CDRT1-206ENST00000571263 LRRIQ4A6NIV6 560 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 KIAA0391O15091 583 aaKnown RBP13.11□□□□□ -0.31
CDRT1-206ENST00000571263 PRPF6O94906 941 aaKnown RBP13.11□□□□□ -0.31
CDRT1-206ENST00000571263 SGPL1O95470 568 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
CDRT1-206ENST00000571263 GJB1P08034 283 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 MYBP10242 640 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
CDRT1-206ENST00000571263 PHKA2P46019 1235 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 CHMP4BP1P59074 171 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
CDRT1-206ENST00000571263 ITGA7Q13683 1181 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 FAM43BQ6ZT52 329 aaPredicted RBP13.11□□□□□ -0.31
CDRT1-206ENST00000571263 RHPN2Q8IUC4 686 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 ANKLE1Q8NAG6 615 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 TRAPPC12Q8WVT3 735 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 ZNF333Q96JL9 665 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 CEP63Q96MT8 703 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 DEFB118Q96PH6 123 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 THAP9Q9H5L6 903 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms