RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 POLGP54098 1239 aaPredicted RBP21.41■■□□□ 1.02
SCARF1-204ENST00000570902 ATAT1Q5SQI0 421 aa21.41■■□□□ 1.02
SCARF1-204ENST00000570902 RARS2Q5T160 578 aaKnown RBP21.41■■□□□ 1.02
SCARF1-204ENST00000570902 KIAA1841Q6NSI8 718 aa21.41■■□□□ 1.02
SCARF1-204ENST00000570902 RASEFQ8IZ41 740 aa21.41■■□□□ 1.02
SCARF1-204ENST00000570902 VPS52Q8N1B4 723 aa21.41■■□□□ 1.02
SCARF1-204ENST00000570902 PLCD3Q8N3E9 789 aa21.41■■□□□ 1.02
SCARF1-204ENST00000570902 RIT2Q99578 217 aa21.41■■□□□ 1.02
SCARF1-204ENST00000570902 GCOM2Q9BZD3 368 aaPredicted RBP21.41■■□□□ 1.02
SCARF1-204ENST00000570902 ZBP1Q9H171 429 aa21.41■■□□□ 1.02
SCARF1-204ENST00000570902 DBR1Q9UK59 544 aaKnown RBP21.41■■□□□ 1.02
SCARF1-204ENST00000570902 USTQ9Y2C2 406 aa21.41■■□□□ 1.02
SCARF1-204ENST00000570902 IRAK3Q9Y616 596 aa21.41■■□□□ 1.02
SCARF1-204ENST00000570902 MYO15AQ9UKN7 3530 aa21.41■■□□□ 1.02
SCARF1-204ENST00000570902 CACNA1HO95180 2353 aa21.4■■□□□ 1.02
SCARF1-204ENST00000570902 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.4■■□□□ 1.02
SCARF1-204ENST00000570902 NT5C1B-RDH14C9J2C7 533 aa21.4■■□□□ 1.02
SCARF1-204ENST00000570902 ADAMTS3O15072 1205 aa21.4■■□□□ 1.02
SCARF1-204ENST00000570902 PRPF3O43395 683 aaKnown RBP21.4■■□□□ 1.02
SCARF1-204ENST00000570902 GAS7O60861 476 aa21.4■■□□□ 1.02
SCARF1-204ENST00000570902 SKIP12755 728 aa21.4■■□□□ 1.02
SCARF1-204ENST00000570902 FGFR4P22455 802 aa21.4■■□□□ 1.02
SCARF1-204ENST00000570902 AKAP17AQ02040 695 aaKnown RBP21.4■■□□□ 1.02
SCARF1-204ENST00000570902 CCDC148Q8NFR7 591 aa21.4■■□□□ 1.02
SCARF1-204ENST00000570902 TRAIPQ9BWF2 469 aa21.4■■□□□ 1.02
SCARF1-204ENST00000570902 ZFHX2Q9C0A1 2572 aaPredicted RBP21.39■■□□□ 1.01
SCARF1-204ENST00000570902 MSH4O15457 936 aa21.39■■□□□ 1.01
SCARF1-204ENST00000570902 ZC3H11AO75152 810 aaKnown RBP eCLIP21.39■■□□□ 1.01
SCARF1-204ENST00000570902 CTSAP10619 480 aa21.39■■□□□ 1.01
SCARF1-204ENST00000570902 SFPQP23246 707 aaKnown RBP eCLIP21.39■■□□□ 1.01
SCARF1-204ENST00000570902 PHKA2P46019 1235 aa21.39■■□□□ 1.01
SCARF1-204ENST00000570902 DNM2P50570 870 aa21.39■■□□□ 1.01
SCARF1-204ENST00000570902 USP11P51784 963 aa21.39■■□□□ 1.01
SCARF1-204ENST00000570902 BMP2KLQ5H9B9 411 aa21.39■■□□□ 1.01
SCARF1-204ENST00000570902 ASTLQ6HA08 431 aaPredicted RBP21.39■■□□□ 1.01
SCARF1-204ENST00000570902 DDX53Q86TM3 631 aaKnown RBP21.39■■□□□ 1.01
SCARF1-204ENST00000570902 TMEM105Q8N8V8 129 aa21.39■■□□□ 1.01
SCARF1-204ENST00000570902 RDM1Q8NG50 284 aa21.39■■□□□ 1.01
SCARF1-204ENST00000570902 TEKT3Q9BXF9 490 aa21.39■■□□□ 1.01
SCARF1-204ENST00000570902 MFSD1Q9H3U5 465 aa21.39■■□□□ 1.01
SCARF1-204ENST00000570902 NID2Q14112 1375 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 CFAP54Q96N23 3096 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 CHMP2AO43633 222 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 WEE2P0C1S8 567 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 TARBP2Q15633 366 aaKnown RBP21.38■■□□□ 1.01
SCARF1-204ENST00000570902 UGCGQ16739 394 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 LRCH2Q5VUJ6 765 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 TWF2Q6IBS0 349 aaKnown RBP21.38■■□□□ 1.01
SCARF1-204ENST00000570902 GLB1LQ6UWU2 654 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 PPFIBP1Q86W92 1011 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 C12orf76Q8N812 135 aaPredicted RBP21.38■■□□□ 1.01
SCARF1-204ENST00000570902 SLC5A5Q92911 643 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 IGSF21Q96ID5 467 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 CCDC136Q96JN2 1154 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 NIFKQ9BYG3 293 aaKnown RBP21.38■■□□□ 1.01
SCARF1-204ENST00000570902 INO80BQ9C086 356 aaPredicted RBP21.38■■□□□ 1.01
SCARF1-204ENST00000570902 STK39Q9UEW8 545 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 LIMD1Q9UGP4 676 aa21.38■■□□□ 1.01
SCARF1-204ENST00000570902 WDR81Q562E7 1941 aa21.37■■□□□ 1.01
SCARF1-204ENST00000570902 ASGR2P07307 311 aa21.37■■□□□ 1.01
SCARF1-204ENST00000570902 NBL1P41271 181 aa21.37■■□□□ 1.01
SCARF1-204ENST00000570902 CLCN5P51795 746 aa21.37■■□□□ 1.01
SCARF1-204ENST00000570902 CABP7Q86V35 215 aa21.37■■□□□ 1.01
SCARF1-204ENST00000570902 UNC45AQ9H3U1 944 aa21.37■■□□□ 1.01
SCARF1-204ENST00000570902 SEPT9Q9UHD8 586 aaPredicted RBP21.37■■□□□ 1.01
SCARF1-204ENST00000570902 CSDE1O75534 798 aaKnown RBP21.36■■□□□ 1.01
SCARF1-204ENST00000570902 EPCAMP16422 314 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 RAB27AP51159 221 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 FOXK2Q01167 660 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 RNASELQ05823 741 aaKnown RBP21.36■■□□□ 1.01
SCARF1-204ENST00000570902 DRP2Q13474 957 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 MTERF2Q49AM1 385 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 XKR3Q5GH77 459 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 NOMO2Q5JPE7 1267 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 Q6ZUG5 572 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 ZNF410Q86VK4 478 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 TMEM173Q86WV6 379 aaPredicted RBP21.36■■□□□ 1.01
SCARF1-204ENST00000570902 SLC22A17Q8WUG5 538 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 AUTS2Q8WXX7 1259 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 ACSF2Q96CM8 615 aaPredicted RBP21.36■■□□□ 1.01
SCARF1-204ENST00000570902 RNF26Q9BY78 433 aaPredicted RBP21.36■■□□□ 1.01
SCARF1-204ENST00000570902 SMOC2Q9H3U7 446 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 SFXN1Q9H9B4 322 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 CYP26B1Q9NR63 512 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 TBC1D13Q9NVG8 400 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 PIN4Q9Y237 131 aaKnown RBP21.36■■□□□ 1.01
SCARF1-204ENST00000570902 PLXNA3P51805 1871 aa21.36■■□□□ 1.01
SCARF1-204ENST00000570902 A0A087WZ62 844 aa21.35■■□□□ 1.01
SCARF1-204ENST00000570902 GALTP07902 379 aa21.35■■□□□ 1.01
SCARF1-204ENST00000570902 MIER3Q7Z3K6 550 aa21.35■■□□□ 1.01
SCARF1-204ENST00000570902 BRF1Q92994 677 aa21.35■■□□□ 1.01
SCARF1-204ENST00000570902 PHKBQ93100 1093 aa21.35■■□□□ 1.01
SCARF1-204ENST00000570902 FDXACB1Q9BRP7 624 aaPredicted RBP21.35■■□□□ 1.01
SCARF1-204ENST00000570902 NRDE2Q9H7Z3 1164 aa21.35■■□□□ 1.01
SCARF1-204ENST00000570902 FAM105AQ9NUU6 356 aa21.35■■□□□ 1.01
SCARF1-204ENST00000570902 IGKV6-21A0A0C4DH24 114 aa21.34■■□□□ 1.01
SCARF1-204ENST00000570902 PRR23AA6NEV1 266 aa21.34■■□□□ 1.01
SCARF1-204ENST00000570902 SPDYE4A6NLX3 237 aa21.34■■□□□ 1.01
SCARF1-204ENST00000570902 ZNF623O75123 536 aa21.34■■□□□ 1.01
SCARF1-204ENST00000570902 TMC5Q6UXY8 1006 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms