RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CNTNAP1P78357 1384 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 WNT10BO00744 389 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 ACTN2P35609 894 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 MUM1L1Q5H9M0 696 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 ZNF746Q6NUN9 644 aaPredicted RBP9.52□□□□□ -0.89
LINC00558-201ENST00000569422 NIM1KQ8IY84 436 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 SH2D3CQ8N5H7 860 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 KCNV2Q8TDN2 545 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 AENQ8WTP8 325 aaKnown RBP9.52□□□□□ -0.89
LINC00558-201ENST00000569422 KIFC3Q9BVG8 833 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 DDX47Q9H0S4 455 aaKnown RBP9.52□□□□□ -0.89
LINC00558-201ENST00000569422 OLFML3Q9NRN5 406 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 RAD51CO43502 376 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 COPB2P35606 906 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 GALCP54803 685 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 NPEPPSP55786 919 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 SOX10P56693 466 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 PPP2R5CQ13362 524 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 SPDYE2Q495Y8 402 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 PLA2G4FQ68DD2 849 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 DEFB132Q7Z7B7 95 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 CCDC127Q96BQ5 260 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 FAM84AQ96KN4 292 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 TAAR1Q96RJ0 339 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 MXRA8Q9BRK3 442 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 CBWD1Q9BRT8 395 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 ACP6Q9NPH0 428 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 PLCB1Q9NQ66 1216 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 TAS2R14Q9NYV8 317 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 LRRC37AA6NMS7 1700 aa9.52□□□□□ -0.89
LINC00558-201ENST00000569422 ASTN2O75129 1339 aaPredicted RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 CCDC169A6NNP5 214 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 ATP1A2P50993 1020 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 PEX3P56589 373 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 MYL7Q01449 175 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 CXCL9Q07325 125 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 DPY19L2P1Q6NXN4 242 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 FOXR2Q6PJQ5 311 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 PALB2Q86YC2 1186 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 ZC3H3Q8IXZ2 948 aaKnown RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 IFT20Q8IY31 132 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 ARL8AQ96BM9 186 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 UBE2TQ9NPD8 197 aaPredicted RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 PCDHGC5Q9Y5F6 944 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 ZHX2Q9Y6X8 837 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 COL11A2P13942 1736 aaPredicted RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 SLC16A4O15374 487 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 HSF2BPO75031 334 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 ITGA4P13612 1032 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 HMGB2P26583 209 aaKnown RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 EPHB4P54760 987 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 ZNF211Q13398 564 aaPredicted RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 FAM102BQ5T8I3 360 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 ZNF772Q68DY9 489 aaPredicted RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 DAW1Q8N136 415 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 METTL13Q8N6R0 699 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 FAM76AQ8TAV0 307 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 LNX1Q8TBB1 728 aaPredicted RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 FIZ1Q96SL8 496 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 INTS2Q9H0H0 1204 aaKnown RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 TSKSQ9UJT2 592 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 FEM1BQ9UK73 627 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 EMSYQ7Z589 1322 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 FOXN3O00409 490 aaPredicted RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 KRIT1O00522 736 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 SLC16A3O15427 465 aaKnown RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 ATP9AO75110 1047 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 ASNSP08243 561 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 KRT13P13646 458 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 TNFAIP3P21580 790 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 HOXA7P31268 230 aaPredicted RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 TRAF1Q13077 416 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 ITGB3BPQ13352 177 aaPredicted RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 MTMR1Q13613 665 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 PRKG1Q13976 671 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 TNIP1Q15025 636 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 STXBP4Q6ZWJ1 553 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 SAMD7Q7Z3H4 446 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 FAM160B2Q86V87 743 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 TPCN2Q8NHX9 752 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 CASKIN2Q8WXE0 1202 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 KAT5Q92993 513 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 ITFG2Q969R8 447 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 SAAL1Q96ER3 474 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 VIPAS39Q9H9C1 493 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 BZW2Q9Y6E2 419 aaKnown RBP9.51□□□□□ -0.89
LINC00558-201ENST00000569422 GJA3Q9Y6H8 435 aa9.51□□□□□ -0.89
LINC00558-201ENST00000569422 F8VZ95 297 aa9.5□□□□□ -0.89
LINC00558-201ENST00000569422 CREB3O43889 395 aa9.5□□□□□ -0.89
LINC00558-201ENST00000569422 SOX5P35711 763 aa9.5□□□□□ -0.89
LINC00558-201ENST00000569422 RPS6P62753 249 aaKnown RBP9.5□□□□□ -0.89
LINC00558-201ENST00000569422 MTMR2Q13614 643 aa9.5□□□□□ -0.89
LINC00558-201ENST00000569422 UGCGQ16739 394 aa9.5□□□□□ -0.89
LINC00558-201ENST00000569422 BMT2Q1RMZ1 405 aa9.5□□□□□ -0.89
LINC00558-201ENST00000569422 PHLDB3Q6NSJ2 640 aa9.5□□□□□ -0.89
LINC00558-201ENST00000569422 MAATS1Q7Z4T9 603 aa9.5□□□□□ -0.89
LINC00558-201ENST00000569422 RTKN2Q8IZC4 609 aa9.5□□□□□ -0.89
LINC00558-201ENST00000569422 USP38Q8NB14 1042 aa9.5□□□□□ -0.89
LINC00558-201ENST00000569422 SLC35G2Q8TBE7 412 aa9.5□□□□□ -0.89
LINC00558-201ENST00000569422 CCDC97Q96F63 343 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms