RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 DDX25Q9UHL0 483 aaKnown RBP15.35■□□□□ 0.05
CNOT1-215ENST00000569020 A0A087WZ62 844 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 IGKV6-21A0A0C4DH24 114 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 DDX11L8A8MPP1 907 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 CSDE1O75534 798 aaKnown RBP15.34■□□□□ 0.05
CNOT1-215ENST00000569020 XBP1P17861 261 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 PBX3P40426 434 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 TECP42680 631 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 PSMC5P62195 406 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 RBM10P98175 930 aaKnown RBP15.34■□□□□ 0.05
CNOT1-215ENST00000569020 DRP2Q13474 957 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 BMS1Q14692 1282 aaKnown RBP15.34■□□□□ 0.05
CNOT1-215ENST00000569020 CBX2Q14781 532 aaPredicted RBP15.34■□□□□ 0.05
CNOT1-215ENST00000569020 INF2Q27J81 1249 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 ANKRD54Q6NXT1 300 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 KRT25Q7Z3Z0 450 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 ZNF598Q86UK7 904 aaKnown RBP15.34■□□□□ 0.05
CNOT1-215ENST00000569020 ZNF410Q86VK4 478 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 VN1R2Q8NFZ6 395 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 ETNPPLQ8TBG4 499 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 RSPH1Q8WYR4 309 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 RPGRIP1Q96KN7 1286 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 MBOAT7Q96N66 472 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 AIFM3Q96NN9 605 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 JPH2Q9BR39 696 aaPredicted RBP15.34■□□□□ 0.05
CNOT1-215ENST00000569020 SH2D3AQ9BRG2 576 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 FDXACB1Q9BRP7 624 aaPredicted RBP15.34■□□□□ 0.05
CNOT1-215ENST00000569020 PDRG1Q9NUG6 133 aa15.34■□□□□ 0.05
CNOT1-215ENST00000569020 TMEM150BA6NC51 233 aa15.33■□□□□ 0.04
CNOT1-215ENST00000569020 DKC1O60832 514 aaKnown RBP eCLIP15.33■□□□□ 0.04
CNOT1-215ENST00000569020 MAFO75444 373 aaPredicted RBP15.33■□□□□ 0.04
CNOT1-215ENST00000569020 CDKL5O76039 1030 aa15.33■□□□□ 0.04
CNOT1-215ENST00000569020 STBD1O95210 358 aa15.33■□□□□ 0.04
CNOT1-215ENST00000569020 SKIP12755 728 aa15.33■□□□□ 0.04
CNOT1-215ENST00000569020 ALDH7A1P49419 539 aaKnown RBP15.33■□□□□ 0.04
CNOT1-215ENST00000569020 KCNC3Q14003 757 aa15.33■□□□□ 0.04
CNOT1-215ENST00000569020 SMC1AQ14683 1233 aaKnown RBP15.33■□□□□ 0.04
CNOT1-215ENST00000569020 NPY5RQ15761 445 aa15.33■□□□□ 0.04
CNOT1-215ENST00000569020 LETM2Q2VYF4 491 aa15.33■□□□□ 0.04
CNOT1-215ENST00000569020 LLGL2Q6P1M3 1020 aa15.33■□□□□ 0.04
CNOT1-215ENST00000569020 RHPN2Q8IUC4 686 aa15.33■□□□□ 0.04
CNOT1-215ENST00000569020 SLC39A11Q8N1S5 342 aa15.33■□□□□ 0.04
CNOT1-215ENST00000569020 SUSD6Q92537 303 aa15.33■□□□□ 0.04
CNOT1-215ENST00000569020 CEP89Q96ST8 783 aa15.33■□□□□ 0.04
CNOT1-215ENST00000569020 SLKQ9H2G2 1235 aaPredicted RBP15.33■□□□□ 0.04
CNOT1-215ENST00000569020 SUCLA2Q9P2R7 463 aaPredicted RBP15.33■□□□□ 0.04
CNOT1-215ENST00000569020 C5orf42Q9H799 3197 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 ARID2Q68CP9 1835 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 CCDC194A0A1B0GVG4 234 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 CARNS1A5YM72 827 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 HIDE1A8MVS5 230 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 ABCB7O75027 752 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 CA8P35219 290 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 PHKA2P46019 1235 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 TWF2Q6IBS0 349 aaKnown RBP15.32■□□□□ 0.04
CNOT1-215ENST00000569020 NEK8Q86SG6 692 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 CASP10Q92851 521 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 PHF20Q9BVI0 1012 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 TRAIPQ9BWF2 469 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 KCNJ14Q9UNX9 436 aa15.32■□□□□ 0.04
CNOT1-215ENST00000569020 PIN4Q9Y237 131 aaKnown RBP15.32■□□□□ 0.04
CNOT1-215ENST00000569020 SLC37A4O43826 429 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 GCFC2P16383 781 aaKnown RBP15.31■□□□□ 0.04
CNOT1-215ENST00000569020 HOXB8P17481 243 aaPredicted RBP15.31■□□□□ 0.04
CNOT1-215ENST00000569020 QARSP47897 775 aaKnown RBP15.31■□□□□ 0.04
CNOT1-215ENST00000569020 RAB27AP51159 221 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 BCAR1P56945 870 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 ZXDAP98168 799 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 SCRN1Q12765 414 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 PPP2R5CQ13362 524 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 TRIM67Q6ZTA4 783 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 ANO5Q75V66 913 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 CATSPER4Q7RTX7 472 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 BMP8AQ7Z5Y6 402 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 EXOC8Q8IYI6 725 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 MRPL43Q8N983 215 aaKnown RBP15.31■□□□□ 0.04
CNOT1-215ENST00000569020 SLC7A3Q8WY07 619 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 TMEM169Q96HH4 297 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 FBXL18Q96ME1 805 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 FAM20AQ96MK3 541 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 NLRP4Q96MN2 994 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 NAP1L4Q99733 375 aaKnown RBP15.31■□□□□ 0.04
CNOT1-215ENST00000569020 S1PR5Q9H228 398 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 CYP26B1Q9NR63 512 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 FAM105AQ9NUU6 356 aa15.31■□□□□ 0.04
CNOT1-215ENST00000569020 C2orf71A6NGG8 1288 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 NT5C1B-RDH14C9J2C7 533 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 EML1O00423 815 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 MARCH6O60337 910 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 CCNT1O60563 726 aaKnown RBP15.3■□□□□ 0.04
CNOT1-215ENST00000569020 ZC3H11AO75152 810 aaKnown RBP eCLIP15.3■□□□□ 0.04
CNOT1-215ENST00000569020 NEFLP07196 543 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 P4HBP07237 508 aaKnown RBP15.3■□□□□ 0.04
CNOT1-215ENST00000569020 TPRNQ4KMQ1 711 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 PLA2G4FQ68DD2 849 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 PPP4R3AQ6IN85 833 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 SYCE2Q6PIF2 218 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 ALYREFQ86V81 257 aaKnown RBP15.3■□□□□ 0.04
CNOT1-215ENST00000569020 KSR1Q8IVT5 923 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 PBXIP1Q96AQ6 731 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms