RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 SEPT9Q9UHD8 586 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-209ENST00000565384 NR2E1Q9Y466 385 aa13.06□□□□□ -0.32
NSMCE1-209ENST00000565384 CSDE1O75534 798 aaKnown RBP13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 AVPR2P30518 371 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 HSPA4P34932 840 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 ALDH7A1P49419 539 aaKnown RBP13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 USP11P51784 963 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 BCAR1P56945 870 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 ITIH3Q06033 890 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 TARBP2Q15633 366 aaKnown RBP13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 MTERF2Q49AM1 385 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 CENPQQ7L2Z9 268 aaPredicted RBP13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 MIER3Q7Z3K6 550 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 FBXL16Q8N461 479 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 KREMEN2Q8NCW0 462 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 RDM1Q8NG50 284 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 TMEM169Q96HH4 297 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 RIPOR3Q96MK2 946 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 AGXT2Q9BYV1 514 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 GCOM2Q9BZD3 368 aaPredicted RBP13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 CHST12Q9NRB3 414 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 FAM86C1Q9NVL1 165 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 SNX14Q9Y5W7 946 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 WDR81Q562E7 1941 aa13.05□□□□□ -0.32
NSMCE1-209ENST00000565384 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 TMEM150BA6NC51 233 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 C2CD4DB7Z1M9 353 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 ZC3H11AO75152 810 aaKnown RBP eCLIP13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 PSMD10O75832 226 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 PDGFBP01127 241 aaPredicted RBP13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 IFNAR1P17181 557 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 SFPQP23246 707 aaKnown RBP eCLIP13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 RPS6KB1P23443 525 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 PHKA2P46019 1235 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 NLRP5P59047 1200 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 MTMR3Q13615 1198 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 BMS1Q14692 1282 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 TMEM173Q86WV6 379 aaPredicted RBP13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 TBCKQ8TEA7 893 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 CEP89Q96ST8 783 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 SH2D3AQ9BRG2 576 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 NIFKQ9BYG3 293 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 ZBP1Q9H171 429 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 SH3GLB2Q9NR46 395 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 SORCS3Q9UPU3 1222 aa13.04□□□□□ -0.32
NSMCE1-209ENST00000565384 A0A087WZ62 844 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 IGKV6-21A0A0C4DH24 114 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 STBD1O95210 358 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 TDP2O95551 362 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 CXCL14O95715 111 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 WEE2P0C1S8 567 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 MTHFRP42898 656 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 DNM2P50570 870 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 CCT2P78371 535 aaKnown RBP13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 CDC42EP1Q00587 391 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 Q4G0T1 1027 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 XKR3Q5GH77 459 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 RARS2Q5T160 578 aaKnown RBP13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 TWF2Q6IBS0 349 aaKnown RBP13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 UBALD2Q8IYN6 164 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 VPS52Q8N1B4 723 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 AUTS2Q8WXX7 1259 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 RSPH1Q8WYR4 309 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 ATOH1Q92858 354 aaPredicted RBP13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 LPPQ93052 612 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 FDXACB1Q9BRP7 624 aaPredicted RBP13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 TRAIPQ9BWF2 469 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 C22orf23Q9BZE7 217 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 IRF2BPLQ9H1B7 796 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 NCOA5Q9HCD5 579 aaKnown RBP13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 DZANK1Q9NVP4 752 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 PIN4Q9Y237 131 aaKnown RBP13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 WDFY4Q6ZS81 3184 aa13.03□□□□□ -0.32
NSMCE1-209ENST00000565384 MEIS3P2A8K0S8 358 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 ST18O60284 1047 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 BRD1O95696 1058 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 CTSAP10619 480 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 SKIP12755 728 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 EPCAMP16422 314 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 PDIA3P30101 505 aaKnown RBP13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 NUBP1P53384 320 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 GIT2Q14161 759 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 LONRF3Q496Y0 759 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 KIAA1841Q6NSI8 718 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 GLB1LQ6UWU2 654 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 B3GNT9Q6UX72 402 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 DDX53Q86TM3 631 aaKnown RBP13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 ZNF410Q86VK4 478 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 RHPN2Q8IUC4 686 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 C12orf76Q8N812 135 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 TDRD5Q8NAT2 981 aaKnown RBP13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 TMEM87AQ8NBN3 555 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 BCL7CQ8WUZ0 217 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 IGSF21Q96ID5 467 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 NLRP4Q96MN2 994 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 INO80BQ9C086 356 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 SMOC2Q9H3U7 446 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 NRDE2Q9H7Z3 1164 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 FAM105AQ9NUU6 356 aa13.02□□□□□ -0.33
NSMCE1-209ENST00000565384 TBC1D13Q9NVG8 400 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms