RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 LOXL4Q96JB6 756 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 SOX7Q9BT81 388 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 HAPLN2Q9GZV7 340 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 PUF60Q9UHX1 559 aaKnown RBP5.87□□□□□ -1.47
PALB2-203ENST00000565038 KCNG1Q9UIX4 513 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 CTDP1Q9Y5B0 961 aaPredicted RBP5.87□□□□□ -1.47
PALB2-203ENST00000565038 PCDHB6Q9Y5E3 794 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 RBM8AQ9Y5S9 174 aaKnown RBP5.87□□□□□ -1.47
PALB2-203ENST00000565038 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 LOC105371045A0A1W2PR82 267 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 PRKD3O94806 890 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 LPLP06858 475 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 CR2P20023 1033 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 SCAND1P57086 179 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 SESN2P58004 480 aaPredicted RBP5.86□□□□□ -1.47
PALB2-203ENST00000565038 HGFACQ04756 655 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 CIR1Q86X95 450 aaPredicted RBP5.86□□□□□ -1.47
PALB2-203ENST00000565038 GIMAP8Q8ND71 665 aaPredicted RBP5.86□□□□□ -1.47
PALB2-203ENST00000565038 TGFBRAP1Q8WUH2 860 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 GCDHQ92947 438 aaPredicted RBP5.86□□□□□ -1.47
PALB2-203ENST00000565038 EAF2Q96CJ1 260 aaPredicted RBP5.86□□□□□ -1.47
PALB2-203ENST00000565038 HIST1H2AHQ96KK5 128 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 HIST1H2AJQ99878 128 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.86□□□□□ -1.47
PALB2-203ENST00000565038 MCM8Q9UJA3 840 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 TMPRSS11EQ9UL52 423 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 OAZ3Q9UMX2 235 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 EDARQ9UNE0 448 aa5.86□□□□□ -1.47
PALB2-203ENST00000565038 GOLGA8AA7E2F4 631 aa5.85□□□□□ -1.47
PALB2-203ENST00000565038 GOLGA8BA8MQT2 603 aa5.85□□□□□ -1.47
PALB2-203ENST00000565038 B8ZZF3 427 aa5.85□□□□□ -1.47
PALB2-203ENST00000565038 AMPD3Q01432 767 aa5.85□□□□□ -1.47
PALB2-203ENST00000565038 PPARAQ07869 468 aa5.85□□□□□ -1.47
PALB2-203ENST00000565038 TRIM25Q14258 630 aaKnown RBP5.85□□□□□ -1.47
PALB2-203ENST00000565038 PITRM1Q5JRX3 1037 aa5.85□□□□□ -1.47
PALB2-203ENST00000565038 RNF219Q5W0B1 726 aaPredicted RBP5.85□□□□□ -1.47
PALB2-203ENST00000565038 TCTN3Q6NUS6 607 aa5.85□□□□□ -1.47
PALB2-203ENST00000565038 SPATS2Q86XZ4 545 aaKnown RBP5.85□□□□□ -1.47
PALB2-203ENST00000565038 LYSMD2Q8IV50 215 aa5.85□□□□□ -1.47
PALB2-203ENST00000565038 CDYL2Q8N8U2 506 aa5.85□□□□□ -1.47
PALB2-203ENST00000565038 GAB3Q8WWW8 586 aa5.85□□□□□ -1.47
PALB2-203ENST00000565038 RPL10LQ96L21 214 aaKnown RBP5.85□□□□□ -1.47
PALB2-203ENST00000565038 ST6GALNAC2Q9UJ37 374 aa5.85□□□□□ -1.47
PALB2-203ENST00000565038 ATP8A1Q9Y2Q0 1164 aa5.85□□□□□ -1.47
PALB2-203ENST00000565038 DAPK3O43293 454 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 FOXS1O43638 330 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 BPIFB4P59827 614 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 TCIRG1Q13488 830 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 ICAM4Q14773 271 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 UGT8Q16880 541 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 GAREM2Q75VX8 874 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 CLEC14AQ86T13 490 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 FAM177A1Q8N128 213 aaPredicted RBP5.84□□□□□ -1.47
PALB2-203ENST00000565038 ANKRD53Q8N9V6 530 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 PLA2G15Q8NCC3 412 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 SLC7A6OSQ96CW6 309 aaPredicted RBP5.84□□□□□ -1.47
PALB2-203ENST00000565038 OR14A2Q96R54 314 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 FDXACB1Q9BRP7 624 aaPredicted RBP5.84□□□□□ -1.47
PALB2-203ENST00000565038 PLA2G12BQ9BX93 195 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 KCTD10Q9H3F6 313 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 C14orf119Q9NWQ9 140 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 PRSS50Q9UI38 385 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 NUMBLQ9Y6R0 609 aa5.84□□□□□ -1.47
PALB2-203ENST00000565038 PHLDB1Q86UU1 1377 aa5.83□□□□□ -1.48
PALB2-203ENST00000565038 ADCY7P51828 1080 aa5.83□□□□□ -1.48
PALB2-203ENST00000565038 LGALS4P56470 323 aa5.83□□□□□ -1.48
PALB2-203ENST00000565038 EVA1CP58658 441 aa5.83□□□□□ -1.48
PALB2-203ENST00000565038 CD69Q07108 199 aa5.83□□□□□ -1.48
PALB2-203ENST00000565038 SAFB2Q14151 953 aaKnown RBP eCLIP5.83□□□□□ -1.48
PALB2-203ENST00000565038 FSCN1Q16658 493 aaKnown RBP5.83□□□□□ -1.48
PALB2-203ENST00000565038 GPR135Q8IZ08 494 aa5.83□□□□□ -1.48
PALB2-203ENST00000565038 AHCYL2Q96HN2 611 aaKnown RBP5.83□□□□□ -1.48
PALB2-203ENST00000565038 TMEM176AQ96HP8 235 aa5.83□□□□□ -1.48
PALB2-203ENST00000565038 C8orf49Q96NF6 230 aa5.83□□□□□ -1.48
PALB2-203ENST00000565038 UIMC1Q96RL1 719 aa5.83□□□□□ -1.48
PALB2-203ENST00000565038 SLC6A15Q9H2J7 730 aa5.83□□□□□ -1.48
PALB2-203ENST00000565038 AGO3Q9H9G7 860 aaKnown RBP5.83□□□□□ -1.48
PALB2-203ENST00000565038 SMPD4Q9NXE4 827 aa5.83□□□□□ -1.48
PALB2-203ENST00000565038 SLC5A4Q9NY91 659 aa5.83□□□□□ -1.48
PALB2-203ENST00000565038 EVLQ9UI08 416 aaPredicted RBP5.83□□□□□ -1.48
PALB2-203ENST00000565038 ZFR2Q9UPR6 939 aaKnown RBP5.83□□□□□ -1.48
PALB2-203ENST00000565038 SLC26A4O43511 780 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 TOX4O94842 621 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 FSBPO95073 299 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 GAAP10253 952 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 CDK11BP21127 795 aaKnown RBP5.82□□□□□ -1.48
PALB2-203ENST00000565038 XPAP23025 273 aaPredicted RBP5.82□□□□□ -1.48
PALB2-203ENST00000565038 CDKN1CP49918 316 aaPredicted RBP5.82□□□□□ -1.48
PALB2-203ENST00000565038 MGAT5Q09328 741 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 DUSP8Q13202 625 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 FAM50AQ14320 339 aaKnown RBP5.82□□□□□ -1.48
PALB2-203ENST00000565038 MAN2A1Q16706 1144 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 KRT40Q6A162 431 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 SLC41A1Q8IVJ1 513 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 FUKQ8N0W3 1084 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 PIK3C3Q8NEB9 887 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 SHCBP1Q8NEM2 672 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 CHST13Q8NET6 341 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 LMBR1Q8WVP7 490 aa5.82□□□□□ -1.48
PALB2-203ENST00000565038 LPPQ93052 612 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms