RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 KCNJ12Q14500 433 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 LRRC71Q8N4P6 559 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 KAT5Q92993 513 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 ERLEC1Q96DZ1 483 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 KLHL11Q9NVR0 708 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 MTUS1Q9ULD2 1270 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 MYH6P13533 1939 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 M0R3G1 203 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 HNRNPCL1O60812 293 aaKnown RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 CFHP08603 1231 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 CIITAP33076 1130 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 GMPSP49915 693 aaPredicted RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 SARNPP82979 210 aaKnown RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 LY6KQ17RY6 165 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 KIAA0753Q2KHM9 967 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 HERC4Q5GLZ8 1057 aaPredicted RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 SPOPLQ6IQ16 392 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 PPP1R21Q6ZMI0 780 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 GPBP1Q86WP2 473 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 CSGALNACT2Q8N6G5 542 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 C4orf32Q8N8J7 132 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 WDR66Q8TBY9 1149 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 BAG1Q99933 345 aaPredicted RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 PRDM16Q9HAZ2 1276 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 ZNF70Q9UC06 446 aaPredicted RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 EMSYQ7Z589 1322 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 KLRG2A4D1S0 409 aaPredicted RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 TTLL1O95922 423 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 ARHGAP25P42331 645 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 FBXO38Q6PIJ6 1188 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 GADL1Q6ZQY3 521 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 HS2ST1Q7LGA3 356 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 PASD1Q8IV76 773 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 ZBTB45Q96K62 511 aaPredicted RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 CNOT6LQ96LI5 555 aaKnown RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 EHD4Q9H223 541 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 JADE2Q9NQC1 790 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 ODF2LQ9ULJ1 636 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 SYNPO2Q9UMS6 1093 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 IFNA8P32881 189 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 BPIFB4P59827 614 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 SNRPFP62306 86 aaKnown RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 HSP90AA5PQ58FG0 334 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 CAPN12Q6ZSI9 719 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 SNX19Q92543 992 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 SPZ1Q9BXG8 430 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 UBXN6Q9BZV1 441 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 ELP3Q9H9T3 547 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 CNOT7Q9UIV1 285 aaKnown RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 SBF2Q86WG5 1849 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 PITPNM2Q9BZ72 1349 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 CCDC78A2IDD5 438 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 NFKBIEO00221 500 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 ATF7P17544 494 aaPredicted RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 MAP1SQ66K74 1059 aaPredicted RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 DPY19L2Q6NUT2 758 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 IRF2BP1Q8IU81 584 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 TTLL6Q8N841 843 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 VPS37AQ8NEZ2 397 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 SMC6Q96SB8 1091 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 ADD3Q9UEY8 706 aaKnown RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 DIS3Q9Y2L1 958 aaKnown RBP3.63□□□□□ -1.83
CHD9-213ENST00000564845 PPP2R2CQ9Y2T4 447 aa3.63□□□□□ -1.83
CHD9-213ENST00000564845 CNTNAP4Q9C0A0 1308 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 SCN9AQ15858 1988 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 RASSF10A6NK89 507 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 NDUFAB1O14561 156 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ATP8B1O43520 1251 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ANXA13P27216 316 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ZBTB33Q86T24 672 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 RETREG2Q8NC44 543 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 PGLYRP2Q96PD5 576 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 NOC4LQ9BVI4 516 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 DPP7Q9UHL4 492 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 TEKT2Q9UIF3 430 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 PSMA7O14818 248 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 MAFGO15525 162 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 DLATP10515 647 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 GCFC2P16383 781 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 WNT7BP56706 349 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ZNF211Q13398 564 aaPredicted RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 SLC30A5Q8TAD4 765 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ATG4CQ96DT6 458 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ERO1AQ96HE7 468 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 MTMR12Q9C0I1 747 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 LACRTQ9GZZ8 138 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 PANK4Q9NVE7 773 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 STIM2Q9P246 746 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 MYH15Q9Y2K3 1946 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 WDR19Q8NEZ3 1342 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 BOD1L1Q8NFC6 3051 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 CCDC151A5D8V7 595 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 PALM3A6NDB9 673 aaPredicted RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 MYBL2P10244 700 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 KRT9P35527 623 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 MTIF2P46199 727 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 USP14P54578 494 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 NRLP54845 237 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 SP2Q02086 613 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms