RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 SWT1Q5T5J6 900 aaKnown RBP16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 RUFY4Q6ZNE9 571 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 HS2ST1Q7LGA3 356 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 ARFGAP2Q8N6H7 521 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 CEP89Q96ST8 783 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 MKNK1Q9BUB5 465 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 TDRD3Q9H7E2 651 aaKnown RBP16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 DMAC2Q9NW81 257 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 TTC7AQ9ULT0 858 aaPredicted RBP16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 COG5Q9UP83 839 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 NCANO14594 1321 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 LRRN2O75325 713 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 TNFAIP3P21580 790 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 HNRNPH1P31943 449 aaKnown RBP16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 USP8P40818 1118 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 MTMR3Q13615 1198 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 NFIL3Q16649 462 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 ODR4Q5SWX8 454 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 PHLDB3Q6NSJ2 640 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 AEBP2Q6ZN18 517 aaPredicted RBP16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 SPATS2Q86XZ4 545 aaKnown RBP16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 BANK1Q8NDB2 785 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 PAGR1Q9BTK6 254 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 ERVK-5Q9HDB9 667 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 APEX2Q9UBZ4 518 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 FOXN3O00409 490 aaPredicted RBP16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 ALDH1B1P30837 517 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 ECE1P42892 770 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 IFT88Q13099 833 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 BIRC3Q13489 604 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 KIAA1755Q5JYT7 1200 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 RBM26Q5T8P6 1007 aaKnown RBP16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 ATP8B4Q8TF62 1192 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 GLG1Q92896 1179 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 FAM114A2Q9NRY5 505 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 ANKRD31Q8N7Z5 1873 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 MNAT1P51948 309 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 PPP2R5CQ13362 524 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 DACT2Q5SW24 774 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 HOOK2Q96ED9 719 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 NCAPGQ9BPX3 1015 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 MRIQ9BWK5 157 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 TMX4Q9H1E5 349 aaPredicted RBP16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 ATP8A1Q9Y2Q0 1164 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 FRMPD4Q14CM0 1322 aa16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 ATXN2Q99700 1313 aaKnown RBP16.77■□□□□ 0.28
GTF3C1-205ENST00000564747 BACH1O14867 736 aa16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 GAS7O60861 476 aa16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 FNTAP49354 379 aa16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 MAGOHP61326 146 aaKnown RBP16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 SLC27A3Q5K4L6 730 aa16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 RNF187Q5TA31 235 aaPredicted RBP16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 AADACL2Q6P093 401 aa16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 CCDC174Q6PII3 467 aa16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 MICALCLQ6ZW33 695 aa16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 ALG3Q92685 438 aa16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 SLC5A5Q92911 643 aa16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 MAGOHBQ96A72 148 aaKnown RBP16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 TMOD4Q9NZQ9 345 aa16.77■□□□□ 0.27
GTF3C1-205ENST00000564747 EXOC3O60645 756 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 PRELPP51888 382 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 ZNF131P52739 623 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 PTENP60484 403 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 PPP2R2AP63151 447 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 MYL7Q01449 175 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 KRT71Q3SY84 523 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 STRIP1Q5VSL9 837 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 KCTD17Q8N5Z5 321 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 SLC20A1Q8WUM9 679 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 CYFIP2Q96F07 1278 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 GMNCA6NCL1 334 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 H0YHG0 523 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 ARP10275 920 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 STAT2P52630 851 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 DLG4P78352 724 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 DR1Q01658 176 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 AGBL2Q5U5Z8 902 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 KCNV1Q6PIU1 500 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 MAEAQ7L5Y9 396 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 FMO2Q99518 471 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 UNC45AQ9H3U1 944 aa16.76■□□□□ 0.27
GTF3C1-205ENST00000564747 NRXN2Q9P2S2 1712 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 ANKRD62A6NC57 917 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 BFSP1Q12934 665 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 PPP2R5AQ15172 486 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 SAMD1Q6SPF0 538 aaPredicted RBP16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 SYCP3Q8IZU3 236 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 LMO3Q8TAP4 145 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 NACC1Q96RE7 527 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 CARD9Q9H257 536 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 SEL1LQ9UBV2 794 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 SRRM3A6NNA2 597 aaPredicted RBP16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 TISP43B9A030 160 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 TRAPPC3O43617 180 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 ECE2O60344 883 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 QPCTQ16769 361 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 DUPD1Q68J44 220 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 CCDC91Q7Z6B0 441 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms