RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 CDAN1Q8IWY9 1227 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 TRIM58Q8NG06 486 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 DYDC2Q96IM9 177 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 UIMC1Q96RL1 719 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 FGFBP2Q9BYJ0 223 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 DEF6Q9H4E7 631 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 SLC38A10Q9HBR0 1119 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 LUC7LQ9NQ29 371 aaKnown RBP7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 PLCB1Q9NQ66 1216 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 FBXO28Q9NVF7 368 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 ARMCX3Q9UH62 379 aaPredicted RBP7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 CCPG1Q9ULG6 757 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 SAR1BQ9Y6B6 198 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 ZNF536O15090 1300 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 RPTORQ8N122 1335 aa7.95□□□□□ -1.14
HERPUD1-209ENST00000564678 SHTN1A0MZ66 631 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 CTAGE15A4D2H0 777 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 CCDC151A5D8V7 595 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 FAM221BA6H8Z2 402 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 LRRC53A6NM62 1247 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 RBAK-RBAKDNI3L0D1 243 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 PJA2O43164 708 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 AKR1B10O60218 316 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 FAM13AO94988 1023 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 ZRANB2O95218 330 aaKnown RBP eCLIP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 SERPING1P05155 500 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 CTAGE8P0CG41 777 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 PRLRP16471 622 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 MZF1P28698 734 aaPredicted RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 INPP5BP32019 993 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 EPS15P42566 896 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 GJA8P48165 433 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 KIF11P52732 1056 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 BRD3Q15059 726 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 SLC9C1Q4G0N8 1177 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 DCAF15Q66K64 600 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 CTAGE6Q86UF2 777 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 CTAGE4Q8IX94 777 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 RNF10Q8N5U6 811 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 RUSC1Q9BVN2 902 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 IFIH1Q9BYX4 1025 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 GLIS2Q9BZE0 524 aaPredicted RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 MTFR1LQ9H019 292 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 OCEL1Q9H607 264 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 ZNF408Q9H9D4 720 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 PARVGQ9HBI0 331 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 NEUROD4Q9HD90 331 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 AIPL1Q9NZN9 384 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 MAP10Q9P2G4 905 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 FBXL5Q9UKA1 691 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 PCDHB9Q9Y5E1 797 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 PCDHA13Q9Y5I0 950 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 GTPBP10A4D1E9 387 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 EPHB6O15197 1021 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 FZD6O60353 706 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 TACC1O75410 805 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 NOL4O94818 638 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 GCNT3O95395 438 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 AFPP02771 609 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 ARP10275 920 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 MAPTP10636 758 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 EPB41P11171 864 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 TAL1P17542 331 aaPredicted RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 GUCY2CP25092 1073 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 HOXD13P35453 343 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 EIF4A3P38919 411 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 CASP5P51878 434 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 PAK2Q13177 524 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 CTTNQ14247 550 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 MYBPC2Q14324 1141 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 OXLD1Q5BKU9 147 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 TEX35Q5T0J7 233 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 SFMBT2Q5VUG0 894 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 PCNX4Q63HM2 1172 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 LHX8Q68G74 356 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 KRT222Q8N1A0 295 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 MSANTD4Q8NCY6 345 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 GOLGA5Q8TBA6 731 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 PIGOQ8TEQ8 1089 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 SMCR8Q8TEV9 937 aaPredicted RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 HNRNPLLQ8WVV9 542 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 CLEC4DQ8WXI8 215 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 SECISBP2LQ93073 1101 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 TATDN2Q93075 761 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 CRELD1Q96HD1 420 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 AGBL1Q96MI9 1066 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 PARD6BQ9BYG5 372 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 LACRTQ9GZZ8 138 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 C12orf49Q9H741 205 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 TBC1D22BQ9NU19 505 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 RAB21Q9UL25 225 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 JRKLQ9Y4A0 524 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 BZW2Q9Y6E2 419 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 FRMPD4Q14CM0 1322 aa7.94□□□□□ -1.14
HERPUD1-209ENST00000564678 FZD9O00144 591 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 NFKBIEO00221 500 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 ZNF263O14978 683 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 PPP1R12BO60237 982 aaPredicted RBP7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 ZBED4O75132 1171 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 PRPF6O94906 941 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms