RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 SH3BP1Q9Y3L3 701 aa6.35□□□□□ -1.39
CHD9-212ENST00000564641 PPP1R12AO14974 1030 aaPredicted RBP6.34□□□□□ -1.39
CHD9-212ENST00000564641 ADH4P08319 380 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 PTX3P26022 381 aaPredicted RBP6.34□□□□□ -1.39
CHD9-212ENST00000564641 DGCR2P98153 550 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 ADCY2Q08462 1091 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 PABPC4Q13310 644 aaKnown RBP eCLIP6.34□□□□□ -1.39
CHD9-212ENST00000564641 SPTY2D1Q68D10 685 aaPredicted RBP6.34□□□□□ -1.39
CHD9-212ENST00000564641 GAREM2Q75VX8 874 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 KANSL1Q7Z3B3 1105 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 PASD1Q8IV76 773 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 ZNF483Q8TF39 744 aaPredicted RBP6.34□□□□□ -1.39
CHD9-212ENST00000564641 UBXN4Q92575 508 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 RPL10LQ96L21 214 aaKnown RBP6.34□□□□□ -1.39
CHD9-212ENST00000564641 DRC1Q96MC2 740 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 GPHA2Q96T91 129 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 TCF25Q9BQ70 676 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 OSBPL6Q9BZF3 934 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 PITHD1Q9GZP4 211 aaPredicted RBP6.34□□□□□ -1.39
CHD9-212ENST00000564641 IL23AQ9NPF7 189 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 IFT57Q9NWB7 429 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 CEP72Q9P209 647 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 RCAN3Q9UKA8 241 aa6.34□□□□□ -1.39
CHD9-212ENST00000564641 GAS7O60861 476 aa6.33□□□□□ -1.4
CHD9-212ENST00000564641 ASMTLO95671 621 aa6.33□□□□□ -1.4
CHD9-212ENST00000564641 SMAD3P84022 425 aaKnown RBP6.33□□□□□ -1.4
CHD9-212ENST00000564641 CNGB1Q14028 1251 aaPredicted RBP6.33□□□□□ -1.4
CHD9-212ENST00000564641 RRP1BQ14684 758 aaKnown RBP6.33□□□□□ -1.4
CHD9-212ENST00000564641 MYBPC3Q14896 1274 aa6.33□□□□□ -1.4
CHD9-212ENST00000564641 KRT40Q6A162 431 aa6.33□□□□□ -1.4
CHD9-212ENST00000564641 ELF4Q99607 663 aaPredicted RBP6.33□□□□□ -1.4
CHD9-212ENST00000564641 TRIM8Q9BZR9 551 aa6.33□□□□□ -1.4
CHD9-212ENST00000564641 USP36Q9P275 1121 aaKnown RBP6.33□□□□□ -1.4
CHD9-212ENST00000564641 MAGEL2Q9UJ55 1249 aa6.33□□□□□ -1.4
CHD9-212ENST00000564641 ING1Q9UK53 422 aaPredicted RBP6.33□□□□□ -1.4
CHD9-212ENST00000564641 A0A0A6YYJ9 748 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 UBE2QL1A1L167 161 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 MTSS1O43312 755 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 TOX4O94842 621 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 FSBPO95073 299 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 SLC9A1P19634 815 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 SDSP20132 328 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 STAT3P40763 770 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 MAN2A2P49641 1150 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 INHBCP55103 352 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 ADAM8P78325 824 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 KIAA1841Q6NSI8 718 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 OXSMQ9NWU1 459 aa6.32□□□□□ -1.4
CHD9-212ENST00000564641 MFAP3LO75121 409 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 IPO13O94829 963 aaKnown RBP6.31□□□□□ -1.4
CHD9-212ENST00000564641 POU3F2P20265 443 aaPredicted RBP6.31□□□□□ -1.4
CHD9-212ENST00000564641 CD40P25942 277 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 KIR2DL3P43628 341 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 LRRC32Q14392 662 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 ELAVL1Q15717 326 aaKnown RBP6.31□□□□□ -1.4
CHD9-212ENST00000564641 CCDC144BQ3MJ40 725 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 FKBP15Q5T1M5 1219 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 IGFL4Q6B9Z1 124 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 ESRP1Q6NXG1 681 aaKnown RBP6.31□□□□□ -1.4
CHD9-212ENST00000564641 HOMER1Q86YM7 354 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 EFHBQ8N7U6 833 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 HIST1H2AHQ96KK5 128 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 PRRX2Q99811 253 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 HIST1H2AJQ99878 128 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 MTG2Q9H4K7 406 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 TOMM22Q9NS69 142 aa6.31□□□□□ -1.4
CHD9-212ENST00000564641 GOLGA6L6A8MZA4 724 aa6.3□□□□□ -1.4
CHD9-212ENST00000564641 OPHN1O60890 802 aa6.3□□□□□ -1.4
CHD9-212ENST00000564641 PRPF6O94906 941 aaKnown RBP6.3□□□□□ -1.4
CHD9-212ENST00000564641 F2P00734 622 aa6.3□□□□□ -1.4
CHD9-212ENST00000564641 NPEPPSP55786 919 aa6.3□□□□□ -1.4
CHD9-212ENST00000564641 CMTM4Q8IZR5 234 aa6.3□□□□□ -1.4
CHD9-212ENST00000564641 NEU4Q8WWR8 484 aaPredicted RBP6.3□□□□□ -1.4
CHD9-212ENST00000564641 ARL8AQ96BM9 186 aa6.3□□□□□ -1.4
CHD9-212ENST00000564641 CHFRQ96EP1 664 aa6.3□□□□□ -1.4
CHD9-212ENST00000564641 MMRN2Q9H8L6 949 aa6.3□□□□□ -1.4
CHD9-212ENST00000564641 HECAQ9UBI9 543 aaPredicted RBP6.3□□□□□ -1.4
CHD9-212ENST00000564641 DNAI1Q9UI46 699 aa6.3□□□□□ -1.4
CHD9-212ENST00000564641 NRP1O14786 923 aa6.29□□□□□ -1.4
CHD9-212ENST00000564641 APOL3O95236 402 aa6.29□□□□□ -1.4
CHD9-212ENST00000564641 NEK4P51957 841 aa6.29□□□□□ -1.4
CHD9-212ENST00000564641 OCRLQ01968 901 aa6.29□□□□□ -1.4
CHD9-212ENST00000564641 ACAP1Q15027 740 aa6.29□□□□□ -1.4
CHD9-212ENST00000564641 FNDC7Q5VTL7 733 aa6.29□□□□□ -1.4
CHD9-212ENST00000564641 CREB3L3Q68CJ9 461 aa6.29□□□□□ -1.4
CHD9-212ENST00000564641 C16orf86Q6ZW13 317 aa6.29□□□□□ -1.4
CHD9-212ENST00000564641 CEP89Q96ST8 783 aa6.29□□□□□ -1.4
CHD9-212ENST00000564641 NOL10Q9BSC4 688 aaKnown RBP6.29□□□□□ -1.4
CHD9-212ENST00000564641 GPR87Q9BY21 358 aa6.29□□□□□ -1.4
CHD9-212ENST00000564641 POFUT1Q9H488 388 aa6.29□□□□□ -1.4
CHD9-212ENST00000564641 REXO2Q9Y3B8 237 aaKnown RBP6.29□□□□□ -1.4
CHD9-212ENST00000564641 PPFIA4O75335 1185 aa6.28□□□□□ -1.4
CHD9-212ENST00000564641 ATP2A2P16615 1042 aaKnown RBP6.28□□□□□ -1.4
CHD9-212ENST00000564641 PTGS2P35354 604 aa6.28□□□□□ -1.4
CHD9-212ENST00000564641 SCNN1GP51170 649 aa6.28□□□□□ -1.4
CHD9-212ENST00000564641 SPIDRQ14159 915 aa6.28□□□□□ -1.4
CHD9-212ENST00000564641 CRB2Q5IJ48 1285 aa6.28□□□□□ -1.4
CHD9-212ENST00000564641 GPR158Q5T848 1215 aa6.28□□□□□ -1.4
CHD9-212ENST00000564641 HTR3DQ70Z44 454 aa6.28□□□□□ -1.4
CHD9-212ENST00000564641 APPBP2Q92624 585 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms