RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 NLRP4Q96MN2 994 aa13.82□□□□□ -0.2
KARS-204ENST00000564578 OSMRQ99650 979 aa13.82□□□□□ -0.2
KARS-204ENST00000564578 FDXACB1Q9BRP7 624 aaPredicted RBP13.82□□□□□ -0.2
KARS-204ENST00000564578 TIPINQ9BVW5 301 aa13.82□□□□□ -0.2
KARS-204ENST00000564578 TRIM9Q9C026 710 aa13.82□□□□□ -0.2
KARS-204ENST00000564578 TRPV2Q9Y5S1 764 aa13.82□□□□□ -0.2
KARS-204ENST00000564578 ASAP2O43150 1006 aa13.81□□□□□ -0.2
KARS-204ENST00000564578 CSDE1O75534 798 aaKnown RBP13.81□□□□□ -0.2
KARS-204ENST00000564578 SRGAP2CP0DJJ0 459 aa13.81□□□□□ -0.2
KARS-204ENST00000564578 AFMP43652 599 aa13.81□□□□□ -0.2
KARS-204ENST00000564578 ZNF131P52739 623 aa13.81□□□□□ -0.2
KARS-204ENST00000564578 CRYBB1P53674 252 aaPredicted RBP13.81□□□□□ -0.2
KARS-204ENST00000564578 FBXO47Q5MNV8 452 aa13.81□□□□□ -0.2
KARS-204ENST00000564578 RNF149Q8NC42 400 aa13.81□□□□□ -0.2
KARS-204ENST00000564578 MINDY3Q9H8M7 445 aa13.81□□□□□ -0.2
KARS-204ENST00000564578 AGO3Q9H9G7 860 aaKnown RBP13.81□□□□□ -0.2
KARS-204ENST00000564578 MAGEF1Q9HAY2 307 aa13.81□□□□□ -0.2
KARS-204ENST00000564578 USP25Q9UHP3 1055 aa13.81□□□□□ -0.2
KARS-204ENST00000564578 ODF2LQ9ULJ1 636 aa13.81□□□□□ -0.2
KARS-204ENST00000564578 SIP14410 1827 aa13.81□□□□□ -0.2
KARS-204ENST00000564578 ADGRA3Q8IWK6 1321 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.8□□□□□ -0.2
KARS-204ENST00000564578 H0YGN5 161 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 CDC42EP1Q00587 391 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 MDM2Q00987 491 aaPredicted RBP13.8□□□□□ -0.2
KARS-204ENST00000564578 POU5F1BQ06416 359 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 LPIN1Q14693 890 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 CNNM4Q6P4Q7 775 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 C16orf59Q7L2K0 433 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 ZNF410Q86VK4 478 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 CEP57L1Q8IYX8 460 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 ZNF710Q8N1W2 664 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 NLRP7Q8WX94 980 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 DRC1Q96MC2 740 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 FIZ1Q96SL8 496 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 C7orf25Q9BPX7 421 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 NTPCRQ9BSD7 190 aaKnown RBP13.8□□□□□ -0.2
KARS-204ENST00000564578 SCN5AQ14524 2016 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 LTBP2Q14767 1821 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 CXCL10P02778 98 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 GHRP10912 638 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 DARSP14868 501 aaKnown RBP13.8□□□□□ -0.2
KARS-204ENST00000564578 EIF4BP23588 611 aaKnown RBP13.8□□□□□ -0.2
KARS-204ENST00000564578 NPTX2P47972 431 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 EPHB4P54760 987 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 PEX3P56589 373 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 CUL4BQ13620 913 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 TCTN1Q2MV58 587 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 CNNM3Q8NE01 707 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 KIFC3Q9BVG8 833 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 BLZF1Q9H2G9 400 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 C17orf75Q9HAS0 396 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 DACT1Q9NYF0 836 aa13.8□□□□□ -0.2
KARS-204ENST00000564578 NOC2LQ9Y3T9 749 aaKnown RBP13.8□□□□□ -0.2
KARS-204ENST00000564578 TANC1Q9C0D5 1861 aa13.79□□□□□ -0.2
KARS-204ENST00000564578 FRMD3A2A2Y4 597 aa13.79□□□□□ -0.2
KARS-204ENST00000564578 M0QZ92 97 aa13.79□□□□□ -0.2
KARS-204ENST00000564578 PLS3P13797 630 aa13.79□□□□□ -0.2
KARS-204ENST00000564578 NAMPTP43490 491 aa13.79□□□□□ -0.2
KARS-204ENST00000564578 PTENP60484 403 aa13.79□□□□□ -0.2
KARS-204ENST00000564578 AMPD3Q01432 767 aa13.79□□□□□ -0.2
KARS-204ENST00000564578 DEFB128Q7Z7B8 93 aa13.79□□□□□ -0.2
KARS-204ENST00000564578 IFNLR1Q8IU57 520 aaPredicted RBP13.79□□□□□ -0.2
KARS-204ENST00000564578 TMEM199Q8N511 208 aa13.79□□□□□ -0.2
KARS-204ENST00000564578 NFKBIZQ9BYH8 718 aa13.79□□□□□ -0.2
KARS-204ENST00000564578 SQORQ9Y6N5 450 aa13.79□□□□□ -0.2
KARS-204ENST00000564578 PARNO95453 639 aaKnown RBP13.78□□□□□ -0.2
KARS-204ENST00000564578 KRT18P05783 430 aaKnown RBP13.78□□□□□ -0.2
KARS-204ENST00000564578 PRR29P0C7W0 189 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 FGFR4P22455 802 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 MCM4P33991 863 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 PLEKHG4Q58EX7 1191 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 CDCA2Q69YH5 1023 aaPredicted RBP13.78□□□□□ -0.2
KARS-204ENST00000564578 FAM228AQ86W67 206 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 TIGD1Q96MW7 591 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 PARVGQ9HBI0 331 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 LRRIQ4A6NIV6 560 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 ACRP10323 421 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 CD52P31358 61 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 RFC2P35250 354 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 MAGEA10P43363 369 aaPredicted RBP13.78□□□□□ -0.2
KARS-204ENST00000564578 FPGSQ05932 587 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 ODR4Q5SWX8 454 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 TSHZ1Q6ZSZ6 1077 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 USP38Q8NB14 1042 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 DBF4BQ8NFT6 615 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 GPT2Q8TD30 523 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 SPIRE2Q8WWL2 714 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 IFT74Q96LB3 600 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 SCLT1Q96NL6 688 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 IFIH1Q9BYX4 1025 aaKnown RBP13.78□□□□□ -0.2
KARS-204ENST00000564578 GCOM2Q9BZD3 368 aaPredicted RBP13.78□□□□□ -0.2
KARS-204ENST00000564578 LRRC27Q9C0I9 530 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 LARSQ9P2J5 1176 aaKnown RBP13.78□□□□□ -0.2
KARS-204ENST00000564578 ARHGAP28Q9P2N2 729 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 PADI3Q9ULW8 664 aa13.78□□□□□ -0.2
KARS-204ENST00000564578 GOLGA6L22H0YM25 854 aa13.77□□□□□ -0.21
KARS-204ENST00000564578 KLRC4O43908 158 aa13.77□□□□□ -0.21
KARS-204ENST00000564578 FAM13AO94988 1023 aa13.77□□□□□ -0.21
KARS-204ENST00000564578 IDEP14735 1019 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms