RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 TMOD1P28289 359 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 ECHS1P30084 290 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 CTNNA1P35221 906 aaKnown RBP12.01□□□□□ -0.49
TCF4-222ENST00000564228 LONP1P36776 959 aaKnown RBP12.01□□□□□ -0.49
TCF4-222ENST00000564228 ODF2Q5BJF6 829 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 SYDE2Q5VT97 1194 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 ARL6IP4Q66PJ3 421 aaKnown RBP12.01□□□□□ -0.49
TCF4-222ENST00000564228 PIGWQ7Z7B1 504 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 LDHDQ86WU2 507 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 AGAP11Q8TF27 550 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 COA7Q96BR5 231 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 TLCD1Q96CP7 247 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 PCMTD1Q96MG8 357 aaPredicted RBP12.01□□□□□ -0.49
TCF4-222ENST00000564228 DUSP9Q99956 384 aaKnown RBP12.01□□□□□ -0.49
TCF4-222ENST00000564228 WDR18Q9BV38 432 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 ELP3Q9H9T3 547 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 LUC7LQ9NQ29 371 aaKnown RBP12.01□□□□□ -0.49
TCF4-222ENST00000564228 TRPM7Q96QT4 1865 aa12□□□□□ -0.49
TCF4-222ENST00000564228 ZBTB5O15062 677 aa12□□□□□ -0.49
TCF4-222ENST00000564228 RAD51CO43502 376 aa12□□□□□ -0.49
TCF4-222ENST00000564228 PEX19P40855 299 aa12□□□□□ -0.49
TCF4-222ENST00000564228 PMS1P54277 932 aaKnown RBP12□□□□□ -0.49
TCF4-222ENST00000564228 HMGCS2P54868 508 aa12□□□□□ -0.49
TCF4-222ENST00000564228 EIF3BP55884 814 aaKnown RBP12□□□□□ -0.49
TCF4-222ENST00000564228 BACE1P56817 501 aa12□□□□□ -0.49
TCF4-222ENST00000564228 PTGDRQ13258 359 aa12□□□□□ -0.49
TCF4-222ENST00000564228 QRICH1Q2TAL8 776 aa12□□□□□ -0.49
TCF4-222ENST00000564228 MIIPQ5JXC2 388 aa12□□□□□ -0.49
TCF4-222ENST00000564228 SLC30A9Q6PML9 568 aa12□□□□□ -0.49
TCF4-222ENST00000564228 ANKRD13AQ8IZ07 590 aa12□□□□□ -0.49
TCF4-222ENST00000564228 CSGALNACT2Q8N6G5 542 aa12□□□□□ -0.49
TCF4-222ENST00000564228 USP38Q8NB14 1042 aa12□□□□□ -0.49
TCF4-222ENST00000564228 LPAR1Q92633 364 aa12□□□□□ -0.49
TCF4-222ENST00000564228 ZBTB10Q96DT7 871 aa12□□□□□ -0.49
TCF4-222ENST00000564228 MTMR8Q96EF0 704 aa12□□□□□ -0.49
TCF4-222ENST00000564228 MS4A14Q96JA4 679 aa12□□□□□ -0.49
TCF4-222ENST00000564228 CLMNQ96JQ2 1002 aa12□□□□□ -0.49
TCF4-222ENST00000564228 CNOT6LQ96LI5 555 aaKnown RBP12□□□□□ -0.49
TCF4-222ENST00000564228 ZNF317Q96PQ6 595 aaPredicted RBP12□□□□□ -0.49
TCF4-222ENST00000564228 PSMB7Q99436 277 aa12□□□□□ -0.49
TCF4-222ENST00000564228 TANGO6Q9C0B7 1094 aa12□□□□□ -0.49
TCF4-222ENST00000564228 CCDC134Q9H6E4 229 aa12□□□□□ -0.49
TCF4-222ENST00000564228 SH3GLB2Q9NR46 395 aa12□□□□□ -0.49
TCF4-222ENST00000564228 PRR12Q9ULL5 1215 aa12□□□□□ -0.49
TCF4-222ENST00000564228 ABCB11O95342 1321 aa12□□□□□ -0.49
TCF4-222ENST00000564228 COL11A1P12107 1806 aaPredicted RBP12□□□□□ -0.49
TCF4-222ENST00000564228 WDR46O15213 610 aaKnown RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 PPP1R11O60927 126 aaPredicted RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 ATP2C2O75185 946 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 PLEKP08567 350 aaPredicted RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 NQO1P15559 274 aaKnown RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 VCAM1P19320 739 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 CCNE1P24864 410 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 KLK7P49862 253 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 ZNF131P52739 623 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 ERVK-9P63128 1117 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 ASTE1Q2TB18 679 aaPredicted RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 CMPK2Q5EBM0 449 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 CWF19L1Q69YN2 538 aaKnown RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 ZFAND2BQ8WV99 257 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 FBXO28Q9NVF7 368 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 NOVA2Q9UNW9 492 aaKnown RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 SIK3Q9Y2K2 1263 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 KLRC4O43908 158 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 WFS1O76024 890 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 CLTAP09496 248 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 LINGO3P0C6S8 592 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 CALML3P27482 149 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 STAT6P42226 847 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 MTIF2P46199 727 aaKnown RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 ROR2Q01974 943 aaKnown RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 HLTFQ14527 1009 aaKnown RBP eCLIP11.99□□□□□ -0.49
TCF4-222ENST00000564228 ZNF174Q15697 407 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 NPY5RQ15761 445 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 COBLL1Q53SF7 1204 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 EARS2Q5JPH6 523 aaKnown RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 MEI1Q5TIA1 1274 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 BTNL9Q6UXG8 535 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 TRPM8Q7Z2W7 1104 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 DRAXINQ8NBI3 349 aaPredicted RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 CHURC1Q8WUH1 139 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 P2RX5Q93086 422 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 NOC4LQ9BVI4 516 aaKnown RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 NSRP1Q9H0G5 558 aaKnown RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 NUCKS1Q9H1E3 243 aaKnown RBP11.99□□□□□ -0.49
TCF4-222ENST00000564228 MAGEF1Q9HAY2 307 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 ZFATQ9P243 1243 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 SALL4Q9UJQ4 1053 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 FEM1BQ9UK73 627 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 MAPK8IP1Q9UQF2 711 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 AFG3L2Q9Y4W6 797 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 PCDHGC5Q9Y5F6 944 aa11.99□□□□□ -0.49
TCF4-222ENST00000564228 SMCO2A6NFE2 343 aa11.98□□□□□ -0.49
TCF4-222ENST00000564228 hCG_1984214I3L0E3 225 aa11.98□□□□□ -0.49
TCF4-222ENST00000564228 ADAMTS3O15072 1205 aa11.98□□□□□ -0.49
TCF4-222ENST00000564228 AP1G2O75843 785 aa11.98□□□□□ -0.49
TCF4-222ENST00000564228 GCLCP48506 637 aaPredicted RBP11.98□□□□□ -0.49
TCF4-222ENST00000564228 MAGOHP61326 146 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms