RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 A0A0U1RQF3 1178 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 LINC00271P0C7V0 271 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 LEXMQ3ZCV2 418 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 CATSPER4Q7RTX7 472 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 CNNM3Q8NE01 707 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 HSD17B14Q9BPX1 270 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 DBR1Q9UK59 544 aaKnown RBP16.53■□□□□ 0.24
SNX29-203ENST00000564111 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.53■□□□□ 0.24
SNX29-203ENST00000564111 MCM7P33993 719 aa16.52■□□□□ 0.24
SNX29-203ENST00000564111 COL19A1Q14993 1142 aa16.52■□□□□ 0.24
SNX29-203ENST00000564111 SPRED2Q7Z698 418 aa16.52■□□□□ 0.24
SNX29-203ENST00000564111 MCPH1Q8NEM0 835 aa16.52■□□□□ 0.24
SNX29-203ENST00000564111 ADAMTS19Q8TE59 1207 aa16.52■□□□□ 0.24
SNX29-203ENST00000564111 PABPC5Q96DU9 382 aaKnown RBP16.52■□□□□ 0.24
SNX29-203ENST00000564111 ZMYM2Q9UBW7 1377 aa16.52■□□□□ 0.24
SNX29-203ENST00000564111 A0A087WZ62 844 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 SLITRK3O94933 977 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 U2AF2P26368 475 aaKnown RBP eCLIP16.51■□□□□ 0.23
SNX29-203ENST00000564111 PAN2Q504Q3 1202 aaKnown RBP16.51■□□□□ 0.23
SNX29-203ENST00000564111 NLRP4Q96MN2 994 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 TBC1D32Q96NH3 1257 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 NACC1Q96RE7 527 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 FDXACB1Q9BRP7 624 aaPredicted RBP16.51■□□□□ 0.23
SNX29-203ENST00000564111 NFKBIZQ9BYH8 718 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 PRDM6Q9NQX0 595 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 CNTNAP2Q9UHC6 1331 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 PRRC2BQ5JSZ5 2229 aaKnown RBP16.51■□□□□ 0.23
SNX29-203ENST00000564111 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.51■□□□□ 0.23
SNX29-203ENST00000564111 TNFRSF10AO00220 468 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 GUCY1B3Q02153 619 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 CTTNQ14247 550 aaKnown RBP16.51■□□□□ 0.23
SNX29-203ENST00000564111 BMS1Q14692 1282 aaKnown RBP16.51■□□□□ 0.23
SNX29-203ENST00000564111 IFNLR1Q8IU57 520 aaPredicted RBP16.51■□□□□ 0.23
SNX29-203ENST00000564111 HACE1Q8IYU2 909 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 CDCA3Q99618 268 aaPredicted RBP16.51■□□□□ 0.23
SNX29-203ENST00000564111 UBN1Q9NPG3 1134 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 AGPAT5Q9NUQ2 364 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 PLAGL2Q9UPG8 496 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 CHD9Q3L8U1 2897 aa16.51■□□□□ 0.23
SNX29-203ENST00000564111 FXR2P51116 673 aaKnown RBP eCLIP16.5■□□□□ 0.23
SNX29-203ENST00000564111 NPEPPSP55786 919 aa16.5■□□□□ 0.23
SNX29-203ENST00000564111 CYP4A11Q02928 519 aa16.5■□□□□ 0.23
SNX29-203ENST00000564111 LAMTOR4Q0VGL1 99 aa16.5■□□□□ 0.23
SNX29-203ENST00000564111 FERMT3Q86UX7 667 aa16.5■□□□□ 0.23
SNX29-203ENST00000564111 KCTD17Q8N5Z5 321 aa16.5■□□□□ 0.23
SNX29-203ENST00000564111 COLGALT1Q8NBJ5 622 aa16.5■□□□□ 0.23
SNX29-203ENST00000564111 ZNF558Q96NG5 402 aa16.5■□□□□ 0.23
SNX29-203ENST00000564111 UHRF1Q96T88 793 aaPredicted RBP16.5■□□□□ 0.23
SNX29-203ENST00000564111 RGL1Q9NZL6 768 aa16.5■□□□□ 0.23
SNX29-203ENST00000564111 PUF60Q9UHX1 559 aaKnown RBP16.5■□□□□ 0.23
SNX29-203ENST00000564111 PLXNA4Q9HCM2 1894 aa16.5■□□□□ 0.23
SNX29-203ENST00000564111 ZNF623O75123 536 aa16.5■□□□□ 0.23
SNX29-203ENST00000564111 SRGAP2BP0DMP2 458 aa16.5■□□□□ 0.23
SNX29-203ENST00000564111 PRPHP41219 470 aa16.5■□□□□ 0.23
SNX29-203ENST00000564111 TWF2Q6IBS0 349 aaKnown RBP16.5■□□□□ 0.23
SNX29-203ENST00000564111 PRPF31Q8WWY3 499 aaKnown RBP16.5■□□□□ 0.23
SNX29-203ENST00000564111 PIN4Q9Y237 131 aaKnown RBP16.5■□□□□ 0.23
SNX29-203ENST00000564111 PHLPP2Q6ZVD8 1323 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 TMEM150BA6NC51 233 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 SLC26A4O43511 780 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 ERLIN2O94905 339 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 RPA1P27694 616 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 PLCB3Q01970 1234 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 RILPL1Q5EBL4 403 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 TCEAL5Q5H9L2 206 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 GLB1LQ6UWU2 654 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 ZNF598Q86UK7 904 aaKnown RBP16.49■□□□□ 0.23
SNX29-203ENST00000564111 URGCPQ8TCY9 931 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 WRAP73Q9P2S5 460 aaPredicted RBP16.49■□□□□ 0.23
SNX29-203ENST00000564111 GRM6O15303 877 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 KRT17Q04695 432 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 DRP2Q13474 957 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 PDIA5Q14554 519 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 THNSL1Q8IYQ7 743 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 KLHL23Q8NBE8 558 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 CASD1Q96PB1 797 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 C2orf40Q9H1Z8 148 aa16.49■□□□□ 0.23
SNX29-203ENST00000564111 H3BQV1 296 aa16.48■□□□□ 0.23
SNX29-203ENST00000564111 ITGB1P05556 798 aa16.48■□□□□ 0.23
SNX29-203ENST00000564111 BMP1P13497 986 aa16.48■□□□□ 0.23
SNX29-203ENST00000564111 ATP2B1P20020 1258 aa16.48■□□□□ 0.23
SNX29-203ENST00000564111 RARRES1P49788 294 aa16.48■□□□□ 0.23
SNX29-203ENST00000564111 SPPL3Q8TCT6 385 aa16.48■□□□□ 0.23
SNX29-203ENST00000564111 TMX3Q96JJ7 454 aa16.48■□□□□ 0.23
SNX29-203ENST00000564111 FAM105AQ9NUU6 356 aa16.48■□□□□ 0.23
SNX29-203ENST00000564111 SMC3Q9UQE7 1217 aa16.48■□□□□ 0.23
SNX29-203ENST00000564111 TMEM143Q96AN5 459 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 TMEM60Q9H2L4 133 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 CWH43Q9H720 699 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 IFT122Q9HBG6 1241 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 TLR9Q9NR96 1032 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 SPG21Q9NZD8 308 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 KANSL3Q9P2N6 904 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 ARHGEF35A5YM69 484 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 BMP15O95972 392 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 FGFR1P11362 822 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 PTENP60484 403 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 PPP2R5AQ15172 486 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 ZNF174Q15697 407 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 FAM102BQ5T8I3 360 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms